-- | --

IDSAVERM_5616 TypeCDS
From6794596 nt length1374
To6793223 aa length457
Gene pI6.26
Definitionputative amino acid decarboxylase M.W (Da)48955
NotePF02784: Pyridoxal-dependent decarboxylase, pyridoxal binding domain AseI frg.B
SignalP v.4.0Non-secretory protein | plot Categorymiscellaneous


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
samSAM23877_0668 putative decarboxylase1447.0e-39
scabSCAB5291 putative amino acid decarboxylase5280.0e+00
nfarnfa48630 hypothetical protein4123.1e-116
cglugi|19553334 COG0019:Diaminopimelate decarboxylase [Corynebacterium glutamicum]1761.5e-45

*sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; cglu, Corynebacterium glutamicum;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Orn_Arg_deC_N1Pyridoxal-dependent decarboxylase, pyridoxal binding domain59-24863.61.6e-17

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_202498445.1 Y4yA family PLP-dependent enzyme [Streptomyces sp. SID5469] 19910.0e+00
WP_097870423.1 Y4yA family PLP-dependent enzyme [Streptomyces sp. rh34] 15690.0e+00
WP_030353580.1 amino acid decarboxylase [Streptomyces scopuliridis] >gb 15580.0e+00
WP_215089444.1 Y4yA family PLP-dependent enzyme [Streptomyces sp. ISL-1] >l... 15510.0e+00
WP_097283321.1 alanine racemase [Streptomyces sp. OK228] >emb 15430.0e+00
WP_143612587.1 MULTISPECIES: alanine racemase [unclassified Streptomyces] >... 15430.0e+00
WP_143600532.1 MULTISPECIES: alanine racemase [unclassified Streptomyces] >... 15420.0e+00
WP_211179400.1 Y4yA family PLP-dependent enzyme [Streptomyces sp. RLA2-12] 15420.0e+00
WP_143607285.1 MULTISPECIES: alanine racemase [unclassified Streptomyces] >... 15360.0e+00
WP_181648142.1 alanine racemase [Streptomyces sp. WAC00263] >lcl 15280.0e+00

PSORT result

LocalizationCertaintyPSORT said
membrane0.1044 Seems to have no N-terminal signal seq.