| ID | SAVERM_5635
| Type | CDS
|
| From | 6813890
| nt length | 1383
|
| To | 6815272
| aa length | 460
|
| Gene | glyS
| pI | 5.56
|
| Definition | putative glycyl-tRNA synthetase
| M.W (Da) | 52433
|
| Note | PF00587: tRNA synthetase class II core domain (G, H, P, S and T)
| AseI frg. | B
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | aminoacyl-tRNA-synthetase
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2504 glycyl-tRNA synthetase | 915 | 0.0e+00
|
| sgr | SGR_5020 putative glycyl-tRNA synthetase | 874 | 0.0e+00
|
| sam | SAM23877_2553 Glycine--tRNA ligase | 914 | 0.0e+00
|
| scab | SCAB62001 putative glycyl-tRNA synthetase | 903 | 0.0e+00
|
| sace | SACE_1500 glycyl-tRNA synthetase | 681 | 0.0e+00
|
| nfar | nfa14590 glyS glycyl-tRNA synthetase | 706 | 0.0e+00
|
| mtub | gi|15609494 glycyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv] | 667 | 0.0e+00
|
| cglu | gi|19553476 COG0423:Glycyl-tRNA synthetase, class II [Corynebacterium glutamicum] | 687 | 0.0e+00
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| HGTP_anticodon | 1 | Anticodon binding domain | 366-455 | 81.2 | 4.4e-23
|
| tRNA-synt_2b | 1 | tRNA synthetase class II core domain (G, H, P, S and T) | 157-333 | 33.3 | 4.1e-08
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2373 | Seems to have no N-terminal signal seq.
|