| ID | SAVERM_5659
| Type | CDS
|
| From | 6846056
| nt length | 927
|
| To | 6846982
| aa length | 308
|
| Gene |
| pI | 7.24
|
| Definition | putative dehydrogenase
| M.W (Da) | 32965
|
| Note | PF00106: short chain dehydrogenase
| AseI frg. | B
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2491 putative oxidoreductase | 416 | 8.0e-148
|
| sgr | SGR_938 putative oxidoreductase | 269 | 3.0e-90
|
| sam | SAM23877_2542 Oxidoreductase | 433 | 6.0e-155
|
| scab | SCAB62271 putative dehydrogenase | 408 | 5.0e-145
|
| nfar | nfa6210 short chain dehydrogenase | 293 | 1.3e-80
|
| paer | PA5031 [gene=PA5031] [prot=probable short chain dehydrogenase] [comment=PA5031] | 259 | 2.8e-70
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| adh_short | 1 | short chain dehydrogenase | 16-215 | 104.5 | 4.5e-30
|
| adh_short_C2 | 1 | Enoyl-(Acyl carrier protein) reductase | 21-231 | 63.4 | 2e-17
|
| KR | 1 | KR domain | 17-85 | 25.8 | 7.8e-06
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.1458 | Seems to have no N-terminal signal seq.
|