| ID | SAVERM_5672
| Type | CDS
|
| From | 6860195
| nt length | 693
|
| To | 6859503
| aa length | 230
|
| Gene |
| pI | 9.59
|
| Definition | putative integral membrane protein
| M.W (Da) | 25047
|
| Note | probable vancomycin sensitivity, Tat substrate, PF02698: DUF218 domain
| AseI frg. | B
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2472 putative integral membrane protein | 350 | 2.0e-124
|
| sgr | SGR_5062 putative integral membrane protein | 329 | 1.0e-115
|
| sam | SAM23877_2525 Integral membrane protein | 342 | 3.0e-121
|
| scab | SCAB62441 putative integral membrane protein | 329 | 2.0e-116
|
| sace | SACE_6721 integral membrane protein | 121 | 3.0e-35
|
| nfar | nfa14680 hypothetical protein | 58 | 4.7e-10
|
| cglu | gi|19553472 COG1434:Uncharacterized ACR [Corynebacterium glutamicum] | 49 | 1.2e-07
|
| ecoli | gi|16130981 putative integral membrane protein [Escherichia coli K12] | 120 | 7.7e-29
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; cglu, Corynebacterium glutamicum; ecoli, Escherichia coli K-12;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DUF218 | 1 | DUF218 domain | 60-180 | 92.0 | 2.7e-26
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_126392048.1 | YdcF family protein [Streptomyces cyaneochromogenes] >gb
| 979 | 4.2e-133 |
| OPG08611.1 | hypothetical protein B1R27_09315 [Streptomyces sp. GKU 895]
| 979 | 7.9e-133 |
| WP_208870823.1 | YdcF family protein [Streptomyces aquilus]
| 971 | 6.8e-132 |
| AZP17535.1 | hypothetical protein EJC51_16290 [Streptomyces aquilus]
| 971 | 7.3e-132 |
| WP_030043097.1 | YdcF family protein [Streptomyces resistomycificus] >gb
| 971 | 7.9e-132 |
| WP_181387567.1 | YdcF family protein [Streptomyces sp. Act143]
| 970 | 8.3e-132 |
| WP_030615522.1 | YdcF family protein [Streptomyces fulvoviolaceus]
| 970 | 9.8e-132 |
| WP_062708771.1 | YdcF family protein [Streptomyces regalis] >gb
| 970 | 1.0e-131 |
| WP_097216478.1 | YdcF family protein [Streptomyces sp. Ag82_G6-1] >emb
| 969 | 1.5e-131 |
| PWI18563.1 | hypothetical protein DI272_33805 [Streptomyces sp. Act143]
| 969 | 1.9e-131 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.3123 | Seems to have no N-terminal signal seq.
|