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IDSAVERM_5712 TypeCDS
From6908622 nt length3945
To6904678 aa length1314
Gene pI5.43
Definitionputative ATP/GTP-binding protein M.W (Da)145524
NotePF07721: Tetratricopeptide repeat AseI frg.B
SignalP v.4.0Non-secretory protein | plot Categorymiscellaneous


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO4632 putative ATP/GTP binding protein3994.0e-121
sgrSGR_5768 putative ATP/GTP-binding protein17010.0e+00
samSAM23877_5683 NB-ARC domain-containing protein4222.0e-125
scabSCAB63411 putative ATP/GTP-binding protein20100.0e+00
nfarnfa13870 hypothetical protein831.1e-16
bsubBG10178 gutR; transcriptional activator of the sorbitol dehydrogenase gene383.4e-03

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; bsub, Bacillus subtilis;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

TPR_123Tetratricopeptide repeat921-987, 999-1073, 1167-1240157.95.1e-47

TPR_105Tetratricopeptide repeat922-956, 999-1039, 1041-1081, 1169-1208, 1215-1250148.41.7e-44

TPR_43Tetratricopeptide repeat875-898, 1169-1193, 1256-127735.27.8e-09

TIR_21TIR domain346-43834.32.1e-08

NB-ARC1NB-ARC domain522-65725.84.5e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_128557664.1 FxSxx-COOH system tetratricopeptide repeat protein [Streptom... 55590.0e+00
WP_189185251.1 FxSxx-COOH system tetratricopeptide repeat protein [Streptom... 54870.0e+00
WP_028800988.1 FxSxx-COOH system tetratricopeptide repeat protein [Streptom... 54830.0e+00
WP_095934110.1 FxSxx-COOH system tetratricopeptide repeat protein [Streptom... 54830.0e+00
WP_164370737.1 FxSxx-COOH system tetratricopeptide repeat protein [Streptom... 54590.0e+00
WP_099499137.1 MULTISPECIES: FxSxx-COOH system tetratricopeptide repeat pro... 54300.0e+00
WP_081217144.1 FxSxx-COOH system tetratricopeptide repeat protein [Streptom... 54130.0e+00
PBC64269.1 ATP/GTP-binding protein [Streptomyces sp. Tue6028] 53610.0e+00
NUT28975.1 tetratricopeptide repeat protein [Streptomyces sp.] 53540.0e+00
WP_200302509.1 FxSxx-COOH system tetratricopeptide repeat protein [Streptom... 53360.0e+00

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.2024 Seems to have no N-terminal signal seq.