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IDSAVERM_5754 TypeCDS
From6957798 nt length843
To6956956 aa length280
Gene pI6.64
Definitionputative DNA-binding protein M.W (Da)31316
NotePF01381: Helix-turn-helix AseI frg.B
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO6236 putative DNA binding protein (partial CDS)3708.0e-131
scabSCAB58481 putative DNA-binding protein4001.0e-142

*coel, Streptomyces coelicolor A3(2); scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain23-8248.11e-12

HTH_31Helix-turn-helix28-7529.07.8e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
QIY95708.1 helix-turn-helix domain-containing protein [Streptomyces sp. S1D4... 10946.3e-149
WP_181651450.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 10902.4e-148
WP_053754602.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 10884.5e-148
WP_168491142.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 10884.5e-148
WP_143607989.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 10791.1e-146
WP_143601530.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 10781.6e-146
WP_153290755.1 helix-turn-helix transcriptional regulator [Streptomyces fag... 10781.7e-146
WP_217565776.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 10642.3e-144
WP_067369558.1 helix-turn-helix domain-containing protein [Streptomyces oli... 10633.1e-144
WP_148013832.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 10572.4e-143

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.3110 Seems to have no N-terminal signal seq.