| ID | SAVERM_5784
| Type | CDS
|
| From | 6989596
| nt length | 495
|
| To | 6990090
| aa length | 164
|
| Gene |
| pI | 6.01
|
| Definition | hypothetical protein
| M.W (Da) | 18171
|
| Note | PF11343: Protein of unknown function (DUF3145)
| AseI frg. | B
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2391 hypothetical protein | 311 | 2.0e-111
|
| sgr | SGR_5104 conserved hypothetical protein | 299 | 2.0e-106
|
| sam | SAM23877_2462 hypothetical protein | 311 | 2.0e-111
|
| scab | SCAB64121 hypothetical protein | 310 | 6.0e-111
|
| sace | SACE_1521 hypothetical protein | 124 | 3.0e-38
|
| nfar | nfa16060 hypothetical protein | 150 | 7.0e-38
|
| mtub | gi|15609393 hypothetical protein Rv2256c [Mycobacterium tuberculosis H37Rv] | 154 | 3.7e-39
|
| ecoli | gi|16129698 succinylglutamate desuccinylase [Escherichia coli K12] | 30 | 8.1e-02
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; ecoli, Escherichia coli K-12;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DUF3145 | 1 | Protein of unknown function (DUF3145) | 6-162 | 246.8 | 5.6e-74
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_202497526.1 | DUF3145 domain-containing protein [Streptomyces sp. SID5469]
| 846 | 7.5e-115 |
| WP_210573945.1 | DUF3145 family protein [Streptomyces sp. GESEQ-4]
| 835 | 2.5e-113 |
| WP_055489857.1 | DUF3145 domain-containing protein [Streptomyces sp. TP-A0356...
| 835 | 2.7e-113 |
| WP_067016284.1 | DUF3145 domain-containing protein [Streptomyces dysideae] >g...
| 833 | 5.4e-113 |
| WP_094217995.1 | MULTISPECIES: DUF3145 domain-containing protein [Streptomyce...
| 833 | 5.8e-113 |
| WP_184960719.1 | DUF3145 domain-containing protein [Streptomyces echinatus] >...
| 833 | 6.1e-113 |
| WP_059131417.1 | MULTISPECIES: DUF3145 domain-containing protein [unclassifie...
| 832 | 7.9e-113 |
| MYV45973.1 | DUF3145 family protein [Streptomyces sp. SID2888]
| 832 | 8.0e-113 |
| WP_071370394.1 | DUF3145 domain-containing protein [Streptomyces sp. MUSC 14]...
| 832 | 8.8e-113 |
| MQY32792.1 | hypothetical protein [Streptomyces sp. RB17]
| 831 | 1.0e-112 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.1682 | Seems to have no N-terminal signal seq.
|