| ID | SAVERM_5790
| Type | CDS
|
| From | 6995237
| nt length | 654
|
| To | 6995890
| aa length | 217
|
| Gene |
| pI | 4.88
|
| Definition | hypothetical protein
| M.W (Da) | 23341
|
| Note | PF02678: Pirin
| AseI frg. | B
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2385 hypothetical protein | 358 | 5.0e-128
|
| sgr | SGR_5110 conserved hypothetical protein | 318 | 4.0e-112
|
| sam | SAM23877_2455 hypothetical protein | 357 | 2.0e-127
|
| scab | SCAB64181 hypothetical protein | 335 | 4.0e-119
|
| nfar | nfa56450 hypothetical protein | 162 | 2.8e-41
|
| mtub | gi|15607322 hypothetical protein Rv0181c [Mycobacterium tuberculosis H37Rv] | 151 | 3.8e-38
|
| ecoli | gi|16131311 hypothetical protein b3439 [Escherichia coli K12] | 97 | 4.9e-22
|
| paer | PA1210 [gene=PA1210] [prot=conserved hypothetical protein] [comment=PA1210] | 104 | 7.1e-24
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Pirin | 1 | Pirin | 17-120 | 100.1 | 5.9e-29
|
| Cupin_2 | 1 | Cupin domain | 48-116 | 34.7 | 9.8e-09
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2034 | Seems to have no N-terminal signal seq.
|