| ID | SAVERM_5801
| Type | CDS
|
| From | 7007846
| nt length | 480
|
| To | 7008325
| aa length | 159
|
| Gene |
| pI | 3.91
|
| Definition | hypothetical protein
| M.W (Da) | 17378
|
| Note | PF11253: Protein of unknown function (DUF3052)
| AseI frg. | B
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2370 hypothetical protein | 285 | 4.0e-101
|
| sgr | SGR_5131 conserved hypothetical protein | 258 | 3.0e-90
|
| sam | SAM23877_2439 hypothetical protein | 256 | 7.0e-90
|
| scab | SCAB64311 hypothetical protein | 285 | 3.0e-101
|
| sace | SACE_1195 hypothetical protein | 140 | 2.0e-44
|
| nfar | nfa16110 hypothetical protein | 145 | 2.1e-36
|
| mtub | gi|15609376 hypothetical protein Rv2239c [Mycobacterium tuberculosis H37Rv] | 144 | 2.1e-36
|
| cglu | gi|19553444 hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum] | 117 | 2.0e-28
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DUF3052 | 1 | Protein of unknown function (DUF3052) | 29-153 | 189.8 | 1.3e-56
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_194236822.1 | DUF3052 domain-containing protein [Streptomyces phyllanthi]
| 667 | 5.8e-88 |
| WP_206327543.1 | DUF3052 family protein [Streptomyces sp. S3(2020)]
| 667 | 6.2e-88 |
| MPY43258.1 | DUF3052 domain-containing protein [Streptomyces phyllanthi]
| 669 | 6.4e-88 |
| WP_152777322.1 | DUF3052 domain-containing protein [Streptomyces spongiae] >g...
| 665 | 1.0e-87 |
| AWE50050.1 | DUF3052 domain-containing protein [Streptomyces nigra] >lcl
| 664 | 1.7e-87 |
| POX49852.1 | DUF3052 domain-containing protein [Streptomyces sp. Ru72]
| 664 | 1.7e-87 |
| WP_164407447.1 | DUF3052 domain-containing protein [Streptomyces sp. SID12488...
| 662 | 3.2e-87 |
| OWA03901.1 | hypothetical protein B9W62_26940 [Streptomyces sp. CS113]
| 663 | 3.6e-87 |
| AXL88407.1 | DUF3052 domain-containing protein [Streptomyces sp. CB09001] >gb
| 662 | 4.1e-87 |
|
| 662 | 4.1e-87 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.3715 | Seems to have no N-terminal signal seq.
|