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IDSAVERM_5828 TypeCDS
From7034613 nt length582
To7035194 aa length193
Gene pI9.49
Definitionputative secreted protein M.W (Da)20142
NotePF01169: Uncharacterized protein family UPF0016 AseI frg.B
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO2347 putative integral membrane protein3327.0e-119
sgrSGR_1199 conserved hypothetical protein1341.0e-40
samSAM23877_2418 Integral membrane protein3371.0e-120
scabSCAB65151 putative integral membrane protein2891.0e-101
nfarnfa1160 hypothetical protein792.0e-16
mtubgi|15610984 PROBABLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv]721.9e-14
paerPA4629 [gene=PA4629] [prot=hypothetical protein] [comment=PA4629]654.0e-12

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

UPF00162Uncharacterized protein family UPF001610-79, 110-183119.84.3e-35

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_217206080.1 TMEM165/GDT1 family protein [Streptomyces sp. AC550_RSS872] 5671.7e-71
WP_164371691.1 TMEM165/GDT1 family protein [Streptomyces sp. SID14446] >gb 5643.9e-71
WP_189185365.1 TMEM165/GDT1 family protein [Streptomyces albiflavescens] >d... 5645.1e-71
WP_015660734.1 TMEM165/GDT1 family protein [Streptomyces davaonensis] >emb 5611.2e-70
WP_081216992.1 TMEM165/GDT1 family protein [Streptomyces sp. M41(2017)] >gb... 5601.6e-70
WP_103552731.1 TMEM165/GDT1 family protein [Streptomyces populi] >gb 5583.1e-70
WP_030678332.1 TMEM165/GDT1 family protein [Streptomyces cellulosae] 5574.3e-70
WP_151468222.1 TMEM165/GDT1 family protein [Streptomyces triticiradicis] >l... 5566.6e-70
WP_037623470.1 TMEM165/GDT1 family protein [Streptomyces aureus] 5541.4e-69
WP_232646604.1 TMEM165/GDT1 family protein [Streptomyces sp. NR30] >lcl 5532.3e-69

PSORT result

LocalizationCertaintyPSORT said
membrane0.3145 Seems to have a cleavable N-term signal seq.