| ID | SAVERM_5831
| Type | CDS
|
| From | 7037506
| nt length | 2088
|
| To | 7039593
| aa length | 695
|
| Gene |
| pI | 7.32
|
| Definition | putative multidrug-efflux transporter
| M.W (Da) | 73387
|
| Note | PF07690: Major Facilitator Superfamily
| AseI frg. | B
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2344 putative integral membrane transport protein | 920 | 0.0e+00
|
| sgr | SGR_5165 putative permease of the major facilitator superfamily | 928 | 0.0e+00
|
| sam | SAM23877_6459 conserved membrane protein of unknown function | 511 | 8.0e-174
|
| scab | SCAB65211 putative multidrug-efflux transporter | 959 | 0.0e+00
|
| sace | SACE_0390 multidrug transporter, MFS superfamily | 378 | 4.0e-124
|
| nfar | nfa11010 transporter | 523 | 1.6e-149
|
| mtub | gi|15609014 PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv] | 451 | 5.7e-128
|
| bsub | BG14028 yusP; similar to multidrug-efflux transporter | 362 | 3.1e-101
|
| ecoli | gi|16130017 multidrug transport protein (MFS family) [Escherichia coli K12] | 186 | 4.5e-48
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| MFS_1 | 1 | Major Facilitator Superfamily | 40-432 | 183.4 | 5.1e-54
|
| TRI12 | 1 | Fungal trichothecene efflux pump (TRI12) | 7-471 | 70.2 | 1.1e-19
|
| Sugar_tr | 1 | Sugar (and other) transporter | 71-205 | 50.8 | 1.1e-13
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.6031 | Seems to have no N-terminal signal seq.
|