| ID | SAVERM_5835
| Type | CDS
|
| From | 7042325
| nt length | 414
|
| To | 7041912
| aa length | 137
|
| Gene |
| pI | 9
|
| Definition | hypothetical protein
| M.W (Da) | 15301
|
| Note | PF09350: Domain of unknown function (DUF1992)
| AseI frg. | B
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2340 hypothetical protein | 173 | 1.0e-57
|
| sgr | SGR_6751 conserved hypothetical protein | 156 | 7.0e-51
|
| sam | SAM23877_2411 hypothetical protein | 174 | 5.0e-58
|
| scab | SCAB65261 hypothetical protein | 184 | 2.0e-61
|
| sace | SACE_3614 hypothetical protein | 149 | 3.0e-48
|
| nfar | nfa29360 hypothetical protein | 109 | 7.4e-26
|
| bsub | BG12938 yflC; hypothetical protein | 28 | 1.5e-01
|
| ecoli | gi|16131172 hypothetical protein b3293 [Escherichia coli K12] | 33 | 5.3e-03
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DUF1992 | 1 | Domain of unknown function (DUF1992) | 15-80 | 67.0 | 1.1e-18
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_220294273.1 | DUF1992 domain-containing protein [Streptomyces sp. MBT84] >...
| 472 | 8.5e-59 |
|
| 472 | 9.7e-59 |
| WP_059125905.1 | DUF1992 domain-containing protein [Streptomyces sp. NRRL F-5...
| 471 | 1.0e-58 |
| WP_103841832.1 | DUF1992 domain-containing protein [Streptomyces sp. Ru72] >g...
| 465 | 1.1e-57 |
| WP_234512923.1 | DUF1992 domain-containing protein [Streptomyces glomeratus] ...
| 462 | 2.9e-57 |
| WP_043439955.1 | DUF1992 domain-containing protein [Streptomyces nodosus] >gb...
| 459 | 1.0e-56 |
| WP_161242796.1 | DUF1992 domain-containing protein [Streptomyces sp. SID2888]...
| 458 | 1.2e-56 |
| WP_200417155.1 | DUF1992 domain-containing protein [Streptomyces sp. Y2F8-2] ...
| 455 | 3.9e-56 |
| WP_071369076.1 | DUF1992 domain-containing protein [Streptomyces colonosanans...
| 451 | 1.4e-55 |
| WP_055489813.1 | DUF1992 domain-containing protein [Streptomyces sp. TP-A0356...
| 440 | 7.1e-54 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.1676 | Seems to have no N-terminal signal seq.
|