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IDSAVERM_5846 TypeCDS
From7054434 nt length966
To7053469 aa length321
Gene pI11.78
Definitionputative integral membrane protein M.W (Da)33185
NotePF03806: AbgT putative transporter family AseI frg.B
SignalP v.4.0Non-secretory protein | plot Categorytransport / binding proteins & lipoproteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO2325 putative integral membrane protein3652.0e-128
sgrSGR_5171 putative integral membrane protein3101.0e-106
samSAM23877_2397 putative cobalt ABC transporter permease3481.0e-121
cglugi|19551768 hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum]2321.5e-62

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; cglu, Corynebacterium glutamicum;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ECF_trnsprt1ECF transporter, substrate-specific component100-28268.95.1e-19

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_151484269.1 ECF transporter S component [Streptomyces albicerus] 8221.7e-106
WP_055618273.1 ECF transporter S component, partial [Streptomyces phaeochro... 8033.6e-104
WP_189838119.1 ECF transporter S component [Streptomyces umbrinus] >dbj 8031.2e-103
WP_190228081.1 ECF transporter S component [Streptomyces umbrinus] >dbj 8031.2e-103
WP_221351606.1 ECF transporter S component [Streptomyces sp. REN17] 7968.6e-103
WP_190036777.1 ECF transporter S component [Streptomyces fructofermentans] ... 7959.5e-103
WP_051707664.1 MULTISPECIES: ECF transporter S component [unclassified Stre... 7981.4e-102
WP_143631524.1 ECF transporter S component [Streptomyces sp. IB201691-2A2] ... 7951.4e-102
WP_168490977.1 MULTISPECIES: ECF transporter S component [Streptomyces] >gb... 7912.4e-102
WP_165267166.1 ECF transporter S component [Streptomyces scabichelini] >gb 7833.4e-101

PSORT result

LocalizationCertaintyPSORT said
membrane0.4736 Seems to have no N-terminal signal seq.