| ID | SAVERM_5878
| Type | CDS
|
| From | 7088942
| nt length | 660
|
| To | 7088283
| aa length | 219
|
| Gene | kdgA
| pI | 4.43
|
| Definition | putative 2-keto-3-deoxygluconate 6-phosphate aldolase and 2-keto-4-hydroxyglutarate aldolase
| M.W (Da) | 22190
|
| Note | PF01081: KDPG and KHG aldolase
| AseI frg. | B
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | specific pathways
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2298 KHG/KDPG aldolase | 286 | 8.0e-100
|
| sgr | SGR_5216 putative KDPG and KHG aldolase | 306 | 7.0e-108
|
| sam | SAM23877_2373 multifunctional 2-keto-3-deoxygluconate 6-phosphate aldolase and 2-keto-4-hydroxyglutarate aldolase and oxaloacetate decarboxylase | 318 | 3.0e-112
|
| scab | SCAB65671 putative 2-keto-3-deoxygluconate 6-phosphate aldolase and 2-keto-4-hydroxyglutarate aldolase | 302 | 2.0e-106
|
| sace | SACE_1739 KHG/KDPG aldolase | 229 | 2.0e-77
|
| bsub | BG11396 kdgA; 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16] | 104 | 3.6e-24
|
| ecoli | gi|16129803 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase [Escherichia coli K12] | 222 | 1.3e-59
|
| paer | PA3131 [gene=PA3131] [prot=probable aldolase] [comment=PA3131] | 201 | 5.7e-53
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Aldolase | 1 | KDPG and KHG aldolase | 17-209 | 233.6 | 1.2e-69
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_168527870.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-d...
| 682 | 4.8e-88 |
| WP_161302651.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-d...
| 681 | 4.8e-88 |
| WP_161179263.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-d...
| 679 | 7.0e-88 |
| WP_093696171.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-d...
| 680 | 7.7e-88 |
| WP_093478056.1 | MULTISPECIES: bifunctional 4-hydroxy-2-oxoglutarate aldolase...
| 679 | 9.5e-88 |
| WP_026248485.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-d...
| 677 | 1.7e-87 |
| WP_153290884.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-d...
| 677 | 2.0e-87 |
| PZT69605.1 | keto-deoxy-phosphogluconate aldolase [Streptomyces sp. SW4]
| 676 | 2.1e-87 |
| WP_164302272.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-d...
| 674 | 4.2e-87 |
| QNF37373.1 | keto-deoxy-phosphogluconate aldolase [Streptomyces sp. FG7]
| 674 | 5.7e-87 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.1383 | Seems to have no N-terminal signal seq.
|