| ID | SAVERM_5917
| Type | CDS
|
| From | 7129278
| nt length | 1440
|
| To | 7130717
| aa length | 479
|
| Gene |
| pI | 10.35
|
| Definition | putative bicyclomycin resistance protein
| M.W (Da) | 49030
|
| Note | PF07690: Major Facilitator Superfamily
| AseI frg. | F
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | detoxification
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2284 putative membrane transport protein | 605 | 0.0e+00
|
| sgr | SGR_5230 putative permease of the major facilitator superfamily | 585 | 0.0e+00
|
| sam | SAM23877_2359 putative MFS-type transporter YdgK | 581 | 0.0e+00
|
| scab | SCAB66161 putative bicyclomycin resistance protein | 660 | 0.0e+00
|
| sace | SACE_0625 drug resistance transporter, Bcr/CflA family | 334 | 2.0e-111
|
| cglu | gi|19553936 COG0477:Permeases of the major facilitator superfamily [Corynebacterium glutamicum] | 260 | 1.1e-70
|
| bsub | BG12178 ydgK; similar to bicyclomycin resistance protein | 316 | 1.7e-87
|
| ecoli | gi|16130120 bicyclomycin resistance protein; transmembrane protein [Escherichia coli K12] | 226 | 3.3e-60
|
| paer | PA3573 [gene=PA3573] [prot=probable MFS transporter] [comment=PA3573] | 269 | 3.6e-73
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| MFS_1 | 1 | Major Facilitator Superfamily | 81-418 | 139.9 | 8.6e-41
|
| Sugar_tr | 1 | Sugar (and other) transporter | 102-180 | 35.1 | 6.1e-09
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_228121004.1 | multidrug effflux MFS transporter [Streptomyces fagopyri]
| 1416 | 0.0e+00 |
| WP_189190590.1 | multidrug effflux MFS transporter [Streptomyces albiflavesce...
| 1403 | 0.0e+00 |
| QFZ78994.1 | Bcr/CflA family efflux MFS transporter [Streptomyces fagopyri]
| 1383 | 0.0e+00 |
| WP_055489756.1 | Bcr/CflA family efflux MFS transporter [Streptomyces sp. TP-...
| 1374 | 0.0e+00 |
| WP_168533556.1 | multidrug effflux MFS transporter [Streptomyces sp. RPA4-2] ...
| 1370 | 0.0e+00 |
| WP_148014120.1 | multidrug effflux MFS transporter [Streptomyces sp. me109] >...
| 1360 | 0.0e+00 |
| WP_099500832.1 | MULTISPECIES: multidrug effflux MFS transporter [Streptomyce...
| 1355 | 0.0e+00 |
| WP_103839988.1 | multidrug effflux MFS transporter [Streptomyces sp. Ru72] >g...
| 1350 | 0.0e+00 |
| GGS95247.1 | Bcr/CflA family drug resistance efflux transporter [Streptomyces...
| 1349 | 0.0e+00 |
| WP_153814478.1 | multidrug effflux MFS transporter [Streptomyces sp. SUK 48]
| 1347 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.4906 | Seems to have no N-terminal signal seq.
|