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IDSAVERM_5940 TypeCDS
From7152632 nt length819
To7151814 aa length272
GeneoleC5 pI10.01
Definitionputative ABC transporter permease protein M.W (Da)29276
NotePF01061: ABC-2 type transporter AseI frg.F
SignalP v.4.0Non-secretory protein | plot Categorytransport / binding proteins & lipoproteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO2258 probable ABC-transporter transmembrane component.3806.0e-135
sgrSGR_5251 putative ABC transporter permease protein3632.0e-128
samSAM23877_2337 ABC transporter transmembrane protein3726.0e-132
scabSCAB66361 putative ABC transporter permease protein4105.0e-147
saceSACE_4276 ABC transporter, permease component2019.0e-65
nfarnfa51440 ABC transporter membrane protein1676.9e-43

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC2_membrane1ABC-2 type transporter25-236122.81.1e-35

ABC2_membrane_31ABC-2 family transporter protein73-25951.57.7e-14

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_059125976.1 MULTISPECIES: ABC transporter permease [unclassified Strepto... 11118.9e-152
WP_078067536.1 ABC transporter permease [Streptomyces jeddahensis] >gb 10972.5e-149
WP_212910558.1 ABC transporter permease [Streptomyces sp. TS71-3] >dbj 10882.5e-148
WP_055489741.1 ABC transporter permease [Streptomyces sp. TP-A0356] 10734.4e-146
WP_149513360.1 ABC transporter permease [Streptomyces apricus] >lcl 10701.8e-145
WP_189930219.1 ABC transporter permease [Streptomyces sulfonofaciens] >dbj 10641.2e-144
WP_190036706.1 ABC transporter permease [Streptomyces fructofermentans] >db... 10605.8e-144
WP_221351777.1 ABC transporter permease [Streptomyces sp. REN17] 10581.2e-143
WP_093660283.1 ABC transporter permease [Streptomyces wuyuanensis] >emb 10562.2e-143
WP_055519085.1 MULTISPECIES: ABC transporter permease [Streptomyces auranti... 10562.3e-143

PSORT result

LocalizationCertaintyPSORT said
membrane0.5501 Seems to have no N-terminal signal seq.