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IDSAVERM_5984 TypeCDS
From7209413 nt length357
To7209769 aa length118
Gene pI5.62
Definitionputative isomerase M.W (Da)12760
NotePF02962: 5-carboxymethyl-2-hydroxymuconate isomerase AseI frg.F
SignalP v.4.0Non-secretory protein | plot Categorymiscellaneous


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO2225 putative isomerase1941.0e-66
sgrSGR_1532 putative isomerase1303.0e-41
samSAM23877_2311 Isomerase1412.0e-45
scabSCAB66721 putative isomerase1964.0e-67
ecoligi|16132169 specificity determinant for hsdM and hsdR [Escherichia coli K12]289.8e-02
paerPA4125 [gene=hpcD] [prot=5-carboxymethyl-2-hydroxymuconate isomerase] [comment=PA4125]367.9e-04

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;

Pfam search result

no hits.

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_141571557.1 isomerase [Streptomyces ipomoeae] >lcl 4592.1e-57
WP_009328191.1 hypothetical protein [Streptomyces ipomoeae] >gb 4574.4e-57
WP_152168232.1 5-carboxymethyl-2-hydroxymuconate Delta-isomerase [Streptomy... 4513.1e-56
WP_200303571.1 5-carboxymethyl-2-hydroxymuconate Delta-isomerase [Streptomy... 4481.0e-55
WP_013004227.1 MULTISPECIES: isomerase [Streptomyces] >lcl 4401.4e-54
WP_037727873.1 isomerase [Streptomyces scabiei] >gb 4401.8e-54
WP_086762038.1 5-carboxymethyl-2-hydroxymuconate Delta-isomerase [Streptomy... 4341.4e-53
WP_149826347.1 isomerase [Streptomyces tailanensis] 4332.1e-53
WP_216591480.1 5-carboxymethyl-2-hydroxymuconate Delta-isomerase [Streptomy... 4305.4e-53
WP_210958791.1 5-carboxymethyl-2-hydroxymuconate Delta-isomerase [Streptomy... 4305.4e-53

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.3698 Seems to have no N-terminal signal seq.