| ID | SAVERM_6006
| Type | CDS
|
| From | 7233548
| nt length | 492
|
| To | 7234039
| aa length | 163
|
| Gene |
| pI | 10.73
|
| Definition | putative membrane protein
| M.W (Da) | 17710
|
| Note | PF06271: RDD family
| AseI frg. | F
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2197 putative integral membrane protein | 253 | 1.0e-88
|
| sgr | SGR_5316 putative membrane protein | 221 | 8.0e-76
|
| sam | SAM23877_2292 Integral membrane protein | 255 | 2.0e-89
|
| scab | SCAB66891 putative membrane protein | 257 | 7.0e-90
|
| sace | SACE_1624 integral membrane protein | 69 | 8.0e-17
|
| nfar | nfa16680 hypothetical protein | 107 | 6.7e-25
|
| mtub | gi|57116957 PROBABLE CONSERVED MEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv] | 102 | 1.7e-23
|
| cglu | gi|19553414 hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum] | 97 | 2.3e-22
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| RDD | 1 | RDD family | 51-156 | 42.0 | 9.6e-11
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.3145 | Seems to have no N-terminal signal seq.
|