| ID | SAVERM_6007
| Type | CDS
|
| From | 7234938
| nt length | 702
|
| To | 7234237
| aa length | 233
|
| Gene |
| pI | 11.52
|
| Definition | putative integral membrane protein
| M.W (Da) | 24720
|
| Note |
| AseI frg. | F
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2196 putative integral membrane protein | 398 | 1.0e-143
|
| sgr | SGR_5317 putative integral membrane protein | 391 | 9.0e-141
|
| sam | SAM23877_2291 Integral membrane protein | 424 | 7.0e-154
|
| scab | SCAB66901 putative membrane protein | 414 | 1.0e-149
|
| sace | SACE_1625 hypothetical protein | 172 | 4.0e-54
|
| nfar | nfa16690 hypothetical protein | 167 | 5.6e-43
|
| mtub | gi|15609356 PROBABLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv] | 158 | 2.6e-40
|
| cglu | gi|19553411 hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum] | 144 | 3.6e-36
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DUF4191 | 1 | Domain of unknown function (DUF4191) | 11-227 | 281.9 | 2.6e-84
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| QIY95432.1 | DUF4191 domain-containing protein [Streptomyces sp. S1D4-11]
| 916 | 2.0e-123 |
| WP_217458417.1 | DUF4191 family protein [Streptomyces sp. BV286] >lcl
| 915 | 3.3e-123 |
| WP_067363458.1 | MULTISPECIES: DUF4191 domain-containing protein [Streptomyce...
| 913 | 7.5e-123 |
| WP_153290977.1 | DUF4191 family protein [Streptomyces fagopyri] >gb
| 912 | 8.9e-123 |
| WP_054229277.1 | MULTISPECIES: DUF4191 domain-containing protein [unclassifie...
| 911 | 1.2e-122 |
| WP_168490697.1 | MULTISPECIES: DUF4191 domain-containing protein [Streptomyce...
| 911 | 1.4e-122 |
| WP_148013662.1 | DUF4191 domain-containing protein [Streptomyces sp. me109] >...
| 910 | 1.9e-122 |
| WP_190036664.1 | DUF4191 domain-containing protein [Streptomyces fructofermen...
| 909 | 3.0e-122 |
| WP_189776609.1 | MULTISPECIES: DUF4191 domain-containing protein [Streptomyce...
| 907 | 5.3e-122 |
| WP_053747104.1 | DUF4191 domain-containing protein [Streptomyces sp. NRRL WC-...
| 906 | 6.3e-122 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.5267 | Seems to have no N-terminal signal seq.
|