| ID | SAVERM_6010
| Type | CDS
|
| From | 7237364
| nt length | 798
|
| To | 7236567
| aa length | 265
|
| Gene | lipB
| pI | 5.24
|
| Definition | putative lipoate-protein ligase
| M.W (Da) | 29264
|
| Note | PF03099: Biotin/lipoate A/B protein ligase family
| AseI frg. | F
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of coenzymes & prosthetic groups
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2193 putative lipoate-protein ligase | 475 | 6.0e-173
|
| sgr | SGR_5320 putative lipoate-protein ligase | 452 | 2.0e-163
|
| sam | SAM23877_2288 Octanoyltransferase | 468 | 3.0e-170
|
| scab | SCAB66931 putative lipoate-protein ligase | 451 | 1.0e-163
|
| sace | SACE_1636 lipoate-protein ligase B | 240 | 9.0e-81
|
| nfar | nfa16870 lipB lipoate-protein ligase | 215 | 2.8e-57
|
| mtub | gi|15609354 lipoyltransferase [Mycobacterium tuberculosis H37Rv] | 210 | 9.1e-56
|
| cglu | gi|19553409 COG0321:Lipoate-protein ligase B [Corynebacterium glutamicum] | 191 | 4.0e-50
|
| ecoli | gi|16128613 lipoyltransferase [Escherichia coli K12] | 85 | 2.6e-18
|
| paer | PA3997 [gene=lipB] [prot=lipoate-protein ligase B] [comment=PA3997] | 78 | 7.3e-16
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
no hits.
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_075026467.1 | MULTISPECIES: lipoyl(octanoyl) transferase LipB [Streptomyce...
| 1331 | 0.0e+00 |
| WP_054229280.1 | MULTISPECIES: lipoyl(octanoyl) transferase LipB [unclassifie...
| 1330 | 0.0e+00 |
| WP_095855078.1 | MULTISPECIES: lipoyl(octanoyl) transferase LipB [unclassifie...
| 1328 | 0.0e+00 |
| QIY95429.1 | lipoyl(octanoyl) transferase LipB [Streptomyces sp. S1D4-11]
| 1328 | 0.0e+00 |
| WP_099923055.1 | MULTISPECIES: lipoyl(octanoyl) transferase LipB [Streptomyce...
| 1325 | 0.0e+00 |
| WP_060902026.1 | lipoyl(octanoyl) transferase LipB [Streptomyces sp. WAC00263...
| 1323 | 0.0e+00 |
| WP_097284367.1 | MULTISPECIES: lipoyl(octanoyl) transferase LipB [unclassifie...
| 1323 | 0.0e+00 |
| WP_067363464.1 | lipoyl(octanoyl) transferase LipB [Streptomyces olivochromog...
| 1322 | 0.0e+00 |
| WP_144315353.1 | lipoyl(octanoyl) transferase LipB [Streptomyces sp. RLB3-17]...
| 1314 | 0.0e+00 |
| WP_033325490.1 | lipoyl(octanoyl) transferase LipB [Streptomyces yerevanensis...
| 1302 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.1193 | Seems to have no N-terminal signal seq.
|