| ID | SAVERM_6024
| Type | CDS
|
| From | 7253969
| nt length | 1389
|
| To | 7252581
| aa length | 462
|
| Gene | lpdA1
| pI | 6.16
|
| Definition | putative dihydrolipoamide dehydrogenase
| M.W (Da) | 52690
|
| Note | PF07992: Pyridine nucleotide-disulphide oxidoreductase
| AseI frg. | F
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | TCA cycle
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2180 putative dihydrolipoamide dehydrogenase | 842 | 0.0e+00
|
| sgr | SGR_5330 putative dihydrolipoamide dehydrogenase | 853 | 0.0e+00
|
| sam | SAM23877_2275 Dihydrolipoyl dehydrogenase | 874 | 0.0e+00
|
| scab | SCAB67061 putative dihydrolipoamide dehydrogenase | 882 | 0.0e+00
|
| sace | SACE_1639 dihydrolipoyl dehydrogenase | 570 | 0.0e+00
|
| mtub | gi|15607603 dihydrolipoamide dehydrogenase [Mycobacterium tuberculosis H37Rv] | 274 | 7.9e-75
|
| cglu | gi|19551612 COG1249:Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes [Corynebacterium glutamicum] | 272 | 3.0e-74
|
| ecoli | gi|16128109 dihydrolipoamide dehydrogenase [Escherichia coli K12] | 248 | 6.0e-67
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; ecoli, Escherichia coli K-12;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Pyr_redox_2 | 1 | Pyridine nucleotide-disulphide oxidoreductase | 9-321 | 225.9 | 5.7e-67
|
| Pyr_redox_dim | 1 | Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain | 341-449 | 83.7 | 9.2e-24
|
| Pyr_redox | 1 | Pyridine nucleotide-disulphide oxidoreductase | 175-252 | 67.3 | 1.3e-18
|
| GIDA | 1 | Glucose inhibited division protein A | 10-77 | 33.0 | 3.2e-08
|
| FAD_binding_2 | 1 | FAD binding domain | 10-45 | 23.7 | 2.1e-05
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.1001 | Seems to have no N-terminal signal seq.
|