| ID | SAVERM_6035
| Type | CDS
|
| From | 7266414
| nt length | 627
|
| To | 7265788
| aa length | 208
|
| Gene |
| pI | 11.95
|
| Definition | putative integral membrane protein
| M.W (Da) | 23892
|
| Note |
| AseI frg. | F
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2169 putative integral membrane protein | 290 | 9.0e-101
|
| sgr | SGR_5340 putative integral membrane protein | 289 | 2.0e-101
|
| sam | SAM23877_2264 Integral membrane protein | 274 | 2.0e-95
|
| scab | SCAB67171 putative integral membrane protein | 337 | 3.0e-120
|
| sace | SACE_1653 hypothetical protein | 108 | 5.0e-30
|
| nfar | nfa17040 hypothetical protein | 114 | 6.2e-27
|
| mtub | gi|57116956 PROBABLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv] | 103 | 8.4e-24
|
| cglu | gi|19553400 hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum] | 98 | 1.5e-22
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DUF3043 | 1 | Protein of unknown function (DUF3043) | 40-206 | 211.0 | 1.1e-62
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_189190467.1 | DUF3043 domain-containing protein [Streptomyces albiflavesce...
| 712 | 4.2e-93 |
| WP_148013641.1 | DUF3043 domain-containing protein [Streptomyces sp. me109] >...
| 702 | 1.2e-91 |
| WP_079089405.1 | MULTISPECIES: DUF3043 domain-containing protein [Streptomyce...
| 698 | 6.4e-91 |
| WP_095933806.1 | DUF3043 domain-containing protein [Streptomyces sp. Tue6028]
| 695 | 1.3e-90 |
| WP_075026446.1 | DUF3043 domain-containing protein [Streptomyces mirabilis] >...
| 694 | 1.9e-90 |
| SOE76213.1 | Protein of unknown function [Streptomyces sp. OV198]
| 695 | 2.0e-90 |
| WP_079064850.1 | MULTISPECIES: DUF3043 domain-containing protein [Streptomyce...
| 694 | 2.5e-90 |
| WP_078629458.1 | DUF3043 domain-containing protein [Streptomyces sp. 142MFCol...
| 692 | 5.2e-90 |
| WP_153293161.1 | DUF3043 domain-containing protein [Streptomyces fagopyri] >g...
| 685 | 4.6e-89 |
| QIY95413.1 | DUF3043 domain-containing protein [Streptomyces sp. S1D4-11]
| 684 | 8.0e-89 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.6562 | Seems to have no N-terminal signal seq.
|