| ID | SAVERM_6071
| Type | CDS
|
| From | 7308543
| nt length | 444
|
| To | 7308986
| aa length | 147
|
| Gene |
| pI | 4.62
|
| Definition | hypothetical protein
| M.W (Da) | 16199
|
| Note | PF03364: Streptomyces cyclase/dehydrase
| AseI frg. | F
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2129 hypothetical protein | 261 | 3.0e-92
|
| sgr | SGR_5374 conserved hypothetical protein | 246 | 6.0e-86
|
| sam | SAM23877_2225 hypothetical protein | 259 | 3.0e-91
|
| scab | SCAB67521 hypothetical protein | 258 | 1.0e-90
|
| sace | SACE_1697 cyclase/dehydrase | 154 | 1.0e-49
|
| nfar | nfa17160 hypothetical protein | 154 | 3.0e-39
|
| mtub | gi|15609322 hypothetical protein Rv2185c [Mycobacterium tuberculosis H37Rv] | 144 | 1.9e-36
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Polyketide_cyc2 | 1 | Polyketide cyclase / dehydrase and lipid transport | 4-143 | 59.3 | 4.5e-16
|
| Polyketide_cyc | 1 | Polyketide cyclase / dehydrase and lipid transport | 11-138 | 51.5 | 1e-13
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.1496 | Seems to have no N-terminal signal seq.
|