| ID | SAVERM_6095
| Type | CDS
|
| From | 7332844
| nt length | 1167
|
| To | 7331678
| aa length | 388
|
| Gene | goxB
| pI | 6.61
|
| Definition | putative glycine oxidase
| M.W (Da) | 41136
|
| Note | PF01266: FAD dependent oxidoreductase
| AseI frg. | F
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of amino acids & related molecules
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2107 putative oxidoreductase | 592 | 0.0e+00
|
| sgr | SGR_5394 putative glycine oxidase | 577 | 0.0e+00
|
| sam | SAM23877_2201 Glycine oxidase | 635 | 0.0e+00
|
| scab | SCAB67741 putative glycine oxidase | 609 | 0.0e+00
|
| sace | SACE_0506 amino acid oxidase flavoprotein ThiO, putative | 237 | 1.0e-75
|
| nfar | nfa53390 amino acid oxidase | 234 | 1.2e-62
|
| mtub | gi|15607556 POSSIBLE THIAMINE BIOSYNTHESIS OXIDOREDUCTASE THIO [Mycobacterium tuberculosis H37Rv] | 175 | 5.3e-45
|
| cglu | gi|19553241 COG0665:Glycine/D-amino acid oxidases (deaminating) [Corynebacterium glutamicum] | 207 | 8.8e-55
|
| bsub | BG13147 goxB, yjbR; glycine oxidase [EC:1.5.3.-] | 135 | 3.1e-33
|
| paer | PA2195 [gene=hcnC] [prot=hydrogen cyanide synthase HcnC] [comment=PA2195] | 172 | 6.1e-44
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DAO | 1 | FAD dependent oxidoreductase | 8-359 | 226.6 | 6.2e-67
|
| NAD_binding_8 | 1 | NAD(P)-binding Rossmann-like domain | 11-48 | 24.1 | 2.9e-05
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.1510 | Seems to have an uncleavable N-term signal seq
|