| ID | SAVERM_6109
| Type | CDS
|
| From | 7346464
| nt length | 393
|
| To | 7346856
| aa length | 130
|
| Gene |
| pI | 11.5
|
| Definition | putative membrane protein
| M.W (Da) | 14753
|
| Note | PF04143: YeeE/YedE family (DUF395)
| AseI frg. | F
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2097 putative membrane protein | 221 | 7.0e-77
|
| sgr | SGR_5408 putative membrane protein | 237 | 5.0e-83
|
| sam | SAM23877_2188 hypothetical protein | 235 | 2.0e-82
|
| scab | SCAB67871 putative membrane protein | 221 | 8.0e-77
|
| sace | SACE_5872 hypothetical protein | 70 | 2.0e-17
|
| nfar | nfa17560 hypothetical protein | 105 | 9.7e-25
|
| mtub | gi|15609306 PROBABLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv] | 106 | 5.8e-25
|
| cglu | gi|19553369 hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum] | 58 | 7.8e-11
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DUF3040 | 1 | Protein of unknown function (DUF3040) | 1-80 | 103.5 | 5e-30
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_093653282.1 | DUF3040 domain-containing protein [Streptomyces wuyuanensis]...
| 568 | 9.7e-74 |
| WP_228977731.1 | DUF3040 domain-containing protein [Streptomyces sp. DH12]
| 567 | 1.9e-73 |
| WP_138055830.1 | DUF3040 domain-containing protein [Streptomyces marianii] >l...
| 566 | 1.9e-73 |
| WP_073752253.1 | DUF3040 domain-containing protein [Streptomyces sp. CB03234]...
| 565 | 3.0e-73 |
| WP_084897044.1 | DUF3040 domain-containing protein [Streptomyces sp. CB03238]...
| 565 | 3.4e-73 |
| WP_173263103.1 | DUF3040 domain-containing protein [Streptomyces sp. CWH03] >...
| 564 | 4.8e-73 |
| WP_017947429.1 | MULTISPECIES: DUF3040 domain-containing protein [Streptomyce...
| 563 | 5.9e-73 |
| WP_189535825.1 | DUF3040 domain-containing protein [Streptomyces roseolilacin...
| 562 | 8.4e-73 |
| WP_109293090.1 | DUF3040 domain-containing protein [Streptomyces spongiicola]...
| 562 | 9.0e-73 |
| WP_058941376.1 | DUF3040 domain-containing protein [Streptomyces kanasensis] ...
| 562 | 9.1e-73 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.5076 | Seems to have no N-terminal signal seq.
|