| ID | SAVERM_6128
| Type | CDS
|
| From | 7369552
| nt length | 285
|
| To | 7369836
| aa length | 94
|
| Gene |
| pI | 9.63
|
| Definition | putative membrane protein
| M.W (Da) | 10786
|
| Note | PF02325: YGGT family
| AseI frg. | F
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2078 hypothetical protein | 177 | 2.0e-60
|
| sgr | SGR_5427 conserved hypothetical protein | 172 | 2.0e-58
|
| sam | SAM23877_2169 putative membrane protein | 178 | 6.0e-61
|
| scab | SCAB68071 putative membrane protein | 169 | 4.0e-57
|
| sace | SACE_5831 possible membrane protein | 62 | 1.0e-15
|
| nfar | nfa17730 hypothetical protein | 108 | 5.2e-26
|
| mtub | gi|15609283 Possible conserved transmembrane protein [Mycobacterium tuberculosis H37Rv] | 82 | 4.0e-18
|
| cglu | gi|19553351 COG0762:Predicted integral membrane protein [Corynebacterium glutamicum] | 74 | 7.4e-16
|
| bsub | BG13376 ylmG; similar to hypothetical proteins | 30 | 1.6e-02
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| YGGT | 1 | YGGT family | 10-90 | 46.2 | 4.4e-12
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.6074 | Seems to have a cleavable N-term signal seq.
|