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IDSAVERM_6159 TypeCDS
From7405326 nt length333
To7405658 aa length110
Gene pI4.5
Definitionhypothetical protein M.W (Da)12018
NotePF01042: Endoribonuclease L-PSP AseI frg.F
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO2049 conserved hypothetical protein1061.0e-31
sgrSGR_5456 conserved hypothetical protein1733.0e-58
samSAM23877_2135 hypothetical protein1031.0e-30
scabSCAB68411 hypothetical protein1203.0e-37
mtubgi|15609841 hypothetical protein Rv2704 [Mycobacterium tuberculosis H37Rv]595.8e-11

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; mtub, Mycobacterium tuberculosis H37Rv;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Ribonuc_L-PSP1Endoribonuclease L-PSP5-10350.51.7e-13

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_202498536.1 Rid family hydrolase [Streptomyces sp. SID5469] 5204.9e-67
WP_168527668.1 RidA family protein [Streptomyces sp. RPA4-2] >gb 4758.3e-60
WP_189840331.1 RidA family protein [Streptomyces umbrinus] >dbj 4541.3e-56
WP_143637774.1 RidA family protein [Streptomyces sp. IB201691-2A2] >lcl 4531.8e-56
WP_128429154.1 RidA family protein [Streptomyces cyaneus] 4522.6e-56
WP_084770846.1 Rid family hydrolase [Streptomyces sp. MOE7] >gb 4523.7e-56
WP_095855183.1 MULTISPECIES: RidA family protein [unclassified Streptomyces... 4507.1e-56
WP_200398860.1 RidA family protein [Streptomyces sp. ZYC-3] >gb 4498.2e-56
WP_033269390.1 Rid family hydrolase [Streptomyces lydicus] >lcl 4499.7e-56
WP_217460151.1 RidA family protein [Streptomyces sp. BV286] >lcl 4489.9e-56

PSORT result

LocalizationCertaintyPSORT said
outside0.3000 Seems to have a cleavable N-term signal seq.