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IDSAVERM_6172 TypeCDS
From7419325 nt length645
To7419969 aa length214
Gene pI7.36
Definitionputative membrane protein M.W (Da)21444
NotePF09534: Tryptophan-associated transmembrane protein (Trp_oprn_chp) AseI frg.F
SignalP v.4.0Non-secretory protein | plot Categorymiscellaneous

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO2042 putative membrane protein2765.0e-96
sgrSGR_5466 conserved hypothetical protein2014.0e-66
samSAM23877_2129 conserved membrane protein of unknown function2672.0e-92
scabSCAB68461 putative membrane protein2493.0e-85
nfarnfa18590 hypothetical protein723.7e-14
mtubgi|15608748 POSSIBLE CONSERVED MEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv]461.7e-06
cglugi|19553289 hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum]481.8e-07

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Trp_oprn_chp1Tryptophan-associated transmembrane protein (Trp_oprn_chp)30-209176.34.7e-52

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_055491800.1 TIGR02234 family membrane protein [Streptomyces sp. TP-A0356... 4331.2e-50
WP_234515061.1 TIGR02234 family membrane protein [Streptomyces glomeratus] ... 4131.4e-47
WP_127180625.1 TIGR02234 family membrane protein [Streptomyces griseoviridi... 4087.3e-47
WP_217252926.1 TIGR02234 family membrane protein [Streptomyces sp. AC602_WC... 4043.4e-46
WP_073721893.1 TIGR02234 family membrane protein [Streptomyces sp. CB02414]... 4034.4e-46
WP_067232664.1 TIGR02234 family membrane protein [Streptomyces longwoodensi... 4026.5e-46
WP_237529647.1 TIGR02234 family membrane protein [Streptomyces sp. SID5469] 3998.2e-46
WP_189187708.1 TIGR02234 family membrane protein [Streptomyces albiflavesce... 4001.4e-45
WP_189840336.1 TIGR02234 family membrane protein [Streptomyces umbrinus] >d... 3991.5e-45
NUP61251.1 TIGR02234 family membrane protein [Nonomuraea sp.] 3991.7e-45

PSORT result

LocalizationCertaintyPSORT said
membrane0.5416 Seems to have no N-terminal signal seq.