| ID | SAVERM_6175
| Type | CDS
|
| From | 7421097
| nt length | 810
|
| To | 7421906
| aa length | 269
|
| Gene | trpC
| pI | 4.97
|
| Definition | putative indole-3-glycerol phosphate synthase
| M.W (Da) | 28142
|
| Note | PF00218: Indole-3-glycerol phosphate synthase
| AseI frg. | F
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of amino acids & related molecules
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2039 indoleglycerol phosphate synthase | 474 | 2.0e-172
|
| sgr | SGR_5469 putative indol-3-glycerol phosphate synthase | 452 | 2.0e-163
|
| sam | SAM23877_2126 Indole-3-glycerol phosphate synthase 1 | 476 | 3.0e-173
|
| scab | SCAB68491 putative indole-3-glycerol phosphate synthase | 462 | 1.0e-167
|
| sace | SACE_5750 indole-3-glycerol-phosphate synthase | 318 | 7.0e-111
|
| nfar | nfa18600 trpC indol-3-glycerol phosphate synthase | 335 | 2.5e-93
|
| mtub | gi|15608749 indole-3-glycerol-phosphate synthase [Mycobacterium tuberculosis H37Rv] | 329 | 1.4e-91
|
| cglu | gi|19554224 COG0134:Indole-3-glycerol phosphate synthase [Corynebacterium glutamicum] | 131 | 3.9e-32
|
| bsub | BG11038 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] | 129 | 1.8e-31
|
| ecoli | gi|16129223 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase [Escherichia coli K12] | 129 | 2.7e-31
|
| paer | PA0651 [gene=trpC] [prot=indole-3-glycerol-phosphate synthase] [comment=PA0651] | 163 | 1.3e-41
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| IGPS | 1 | Indole-3-glycerol phosphate synthase | 4-255 | 267.0 | 1.2e-79
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_064073001.1 | indole-3-glycerol phosphate synthase TrpC [Streptomyces albu...
| 1113 | 3.9e-152 |
| MYW19421.1 | indole-3-glycerol phosphate synthase TrpC [Streptomyces sp. SID29...
| 1112 | 5.4e-152 |
| WP_018545655.1 | indole-3-glycerol phosphate synthase TrpC [Streptomyces sp. ...
| 1111 | 6.1e-152 |
| WP_103839909.1 | indole-3-glycerol phosphate synthase TrpC [Streptomyces sp. ...
| 1111 | 6.5e-152 |
| MYW44707.1 | indole-3-glycerol phosphate synthase TrpC [Streptomyces sp. SID16...
| 1111 | 8.1e-152 |
| WP_067313470.1 | indole-3-glycerol phosphate synthase TrpC [Streptomyces gris...
| 1108 | 2.1e-151 |
| WP_190017723.1 | indole-3-glycerol phosphate synthase TrpC [Streptomyces luce...
| 1107 | 2.5e-151 |
|
| 1107 | 3.3e-151 |
| MYQ46783.1 | indole-3-glycerol phosphate synthase TrpC [Streptomyces sp. SID49...
| 1106 | 3.7e-151 |
| WP_153291111.1 | indole-3-glycerol phosphate synthase TrpC [Streptomyces fago...
| 1106 | 3.7e-151 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.4092 | Seems to have no N-terminal signal seq.
|