| ID | SAVERM_6179
| Type | CDS
|
| From | 7424712
| nt length | 831
|
| To | 7425542
| aa length | 276
|
| Gene |
| pI | 9.42
|
| Definition | putative integral membrane protein
| M.W (Da) | 29179
|
| Note | PF01323: DSBA-like thioredoxin domain
| AseI frg. | F
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2035 putative integral membrane protein | 400 | 4.0e-143
|
| sgr | SGR_5473 putative integral membrane protein | 287 | 7.0e-98
|
| sam | SAM23877_2122 putative membrane protein | 396 | 3.0e-141
|
| scab | SCAB68521 putative integral membrane protein | 362 | 5.0e-128
|
| nfar | nfa52230 hypothetical protein | 106 | 1.9e-24
|
| mtub | gi|15610106 POSSIBLE CONSERVED MEMBRANE OR SECRETED PROTEIN [Mycobacterium tuberculosis H37Rv] | 90 | 8.4e-20
|
| cglu | gi|19551268 COG1651:Protein-disulfide isomerase [Corynebacterium glutamicum] | 55 | 3.6e-09
|
| bsub | BG14104 bdbD, yvgV; thiol-disulfide oxidoreductases | 59 | 2.4e-10
|
| ecoli | gi|16128012 regulatory peptide whose translation enables hokC (gef) expression [Escherichia coli K12] | 29 | 3.0e-01
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Thioredoxin_4 | 1 | Thioredoxin | 102-271 | 93.7 | 1.3e-26
|
| DSBA | 1 | DSBA-like thioredoxin domain | 112-254 | 34.7 | 1.4e-08
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_202498541.1 | thioredoxin domain-containing protein [Streptomyces sp. SID5...
| 1028 | 2.8e-139 |
| QDN56996.1 | hypothetical protein FNV67_18185 [Streptomyces sp. S1D4-20] >gb
| 952 | 2.0e-127 |
| POX50800.1 | hypothetical protein C3488_13770 [Streptomyces sp. Ru72]
| 898 | 3.0e-119 |
| PKT72234.1 | hypothetical protein CW362_15005 [Streptomyces populi]
| 884 | 3.4e-117 |
|
| 881 | 1.1e-116 |
|
| 877 | 4.7e-116 |
| GAQ72286.1 | disulfide bond formation protein D precursor [Streptomyces turgi...
| 872 | 2.9e-115 |
| WP_179436606.1 | MULTISPECIES: thioredoxin domain-containing protein [unclass...
| 865 | 1.5e-114 |
| WP_164331684.1 | MULTISPECIES: thioredoxin domain-containing protein [unclass...
| 864 | 2.7e-114 |
| WP_060902106.1 | thioredoxin domain-containing protein [Streptomyces sp. WAC0...
| 860 | 1.0e-113 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.5819 | Seems to have no N-terminal signal seq.
|