| ID | SAVERM_6181
| Type | CDS
|
| From | 7427591
| nt length | 858
|
| To | 7426734
| aa length | 285
|
| Gene | citE1
| pI | 6.37
|
| Definition | putative citrate lyase beta chain
| M.W (Da) | 30097
|
| Note | PF03328: HpcH/HpaI aldolase/citrate lyase family
| AseI frg. | F
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | main glycolytic pathways
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2033 putative citrate lyase beta chain | 356 | 3.0e-125
|
| sgr | SGR_5475 putative citrate lyase beta chain | 272 | 5.0e-92
|
| sam | SAM23877_2120 Citrate lyase beta chain | 366 | 3.0e-129
|
| scab | SCAB68541 putative citrate lyase beta chain | 355 | 1.0e-124
|
| sace | SACE_2331 citrate lyase beta subunit | 123 | 3.0e-34
|
| nfar | nfa50410 citrate lyase beta subunit | 105 | 5.9e-24
|
| mtub | gi|15609635 PROBABLE CITRATE (PRO-3S)-LYASE (BETA SUBUNIT) CITE (CITRASE) (CITRATASE) (CITRITASE) (CITRIDESMOLASE) (CITRASE ALDOLASE) [Mycobacterium tuberculosis H37Rv] | 120 | 1.0e-28
|
| cglu | gi|19552089 COG2301:Citrate lyase beta subunit [Corynebacterium glutamicum] | 78 | 2.5e-16
|
| paer | PA0883 [gene=PA0883] [prot=probable acyl-CoA lyase beta chain] [comment=PA0883] | 124 | 9.8e-30
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| HpcH_HpaI | 1 | HpcH/HpaI aldolase/citrate lyase family | 10-224 | 137.6 | 3e-40
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.1426 | Seems to have no N-terminal signal seq.
|