| ID | SAVERM_6222
| Type | CDS
|
| From | 7475633
| nt length | 1776
|
| To | 7473858
| aa length | 591
|
| Gene | livM3
| pI | 5.41
|
| Definition | putative branched-chain amino acid ABC transporter permease protein
| M.W (Da) | 61799
|
| Note | PF02653: Branched-chain amino acid transport system / permease component
| AseI frg. | F
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2010 putative branched chain amino acid transport permease | 672 | 0.0e+00
|
| sgr | SGR_5521 putative branched chain amino acid ABC transporter permease protein | 661 | 0.0e+00
|
| sam | SAM23877_2094 Branched chain amino acid transport permease | 634 | 0.0e+00
|
| scab | SCAB68911 putative branched-chain amino acid ABC transporter permease protein | 597 | 0.0e+00
|
| sace | SACE_4882 ABC transporter permease protein | 139 | 4.0e-37
|
| nfar | nfa18730 branched-chain amino acid transporter component | 174 | 2.5e-44
|
| ecoli | gi|16131328 high-affinity branched-chain amino acid transport [Escherichia coli K12] | 196 | 3.6e-51
|
| paer | PA1072 [gene=braE] [prot=branched-chain amino acid transport protein BraE] [comment=PA1072] | 218 | 1.6e-57
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| BPD_transp_2 | 1 | Branched-chain amino acid transport system / permease component | 261-549 | 135.7 | 1.5e-39
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_189492026.1 | branched-chain amino acid ABC transporter permease [Streptom...
| 2089 | 0.0e+00 |
| RVU22198.1 | branched-chain amino acid ABC transporter permease [Streptomyces ...
| 2089 | 0.0e+00 |
| WP_116503772.1 | branched-chain amino acid ABC transporter permease [Streptom...
| 2046 | 0.0e+00 |
| WP_016435943.1 | branched-chain amino acid ABC transporter permease [Streptom...
| 2030 | 0.0e+00 |
| WP_181362521.1 | MULTISPECIES: branched-chain amino acid ABC transporter perm...
| 2028 | 0.0e+00 |
| PTM91691.1 | amino acid/amide ABC transporter membrane protein 2 (HAAT family)...
| 2028 | 0.0e+00 |
| WP_189187790.1 | branched-chain amino acid ABC transporter permease [Streptom...
| 2022 | 0.0e+00 |
| WP_030933082.1 | branched-chain amino acid ABC transporter permease [Streptom...
| 2022 | 0.0e+00 |
| WP_030683409.1 | branched-chain amino acid ABC transporter permease [Streptom...
| 2017 | 0.0e+00 |
| WP_100592604.1 | branched-chain amino acid ABC transporter permease [Streptom...
| 2015 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.5097 | Seems to have a cleavable N-term signal seq.
|