| ID | SAVERM_6225
| Type | CDS
|
| From | 7479293
| nt length | 462
|
| To | 7478832
| aa length | 153
|
| Gene |
| pI | 6.88
|
| Definition | hypothetical protein
| M.W (Da) | 15999
|
| Note | PF03061: Thioesterase superfamily
| AseI frg. | F
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2005 hypothetical protein | 274 | 2.0e-96
|
| sgr | SGR_5524 conserved hypothetical protein | 275 | 3.0e-97
|
| sam | SAM23877_2089 ComA operon protein 2 | 280 | 4.0e-99
|
| scab | SCAB68961 hypothetical protein | 277 | 6.0e-98
|
| sace | SACE_5438 phenylacetic acid degradation-related protein | 171 | 3.0e-56
|
| nfar | nfa25230 thioesterase | 77 | 3.9e-16
|
| mtub | gi|15608984 hypothetical protein Rv1847 [Mycobacterium tuberculosis H37Rv] | 48 | 1.5e-07
|
| cglu | gi|19552668 COG2050:Uncharacterized protein, possibly involved in aromatic compounds catabolism [Corynebacterium glutamicum] | 54 | 2.0e-09
|
| bsub | BG10382 yuxO, srfB, comAB; similar to unknown proteins | 92 | 8.0e-21
|
| ecoli | gi|16128580 hypothetical protein b0597 [Escherichia coli K12] | 107 | 2.7e-25
|
| paer | PA1618 [gene=PA1618] [prot=conserved hypothetical protein] [comment=PA1618] | 100 | 5.8e-23
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| 4HBT | 1 | Thioesterase superfamily | 62-139 | 61.3 | 7.9e-17
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_129309699.1 | hotdog fold thioesterase [Streptomyces sp. L2]
| 734 | 4.5e-98 |
| WP_043439428.1 | MULTISPECIES: hotdog fold thioesterase [Streptomyces] >gb
| 733 | 5.0e-98 |
| WP_094220288.1 | hotdog fold thioesterase [Streptomyces diastatochromogenes] ...
| 729 | 2.0e-97 |
| WP_059133152.1 | MULTISPECIES: hotdog fold thioesterase [unclassified Strepto...
| 729 | 2.1e-97 |
| WP_071367856.1 | hotdog fold thioesterase [Streptomyces colonosanans] >gb
| 729 | 2.2e-97 |
|
| 729 | 2.8e-97 |
| WP_103839648.1 | hotdog fold thioesterase [Streptomyces sp. Ru72] >gb
| 728 | 3.1e-97 |
| WP_055491757.1 | hotdog fold thioesterase [Streptomyces sp. TP-A0356]
| 728 | 3.2e-97 |
| WP_053756706.1 | MULTISPECIES: hotdog fold thioesterase [Streptomyces] >gb
| 727 | 5.1e-97 |
| WP_018104551.1 | MULTISPECIES: hotdog fold thioesterase [unclassified Strepto...
| 726 | 5.8e-97 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.1992 | Seems to have no N-terminal signal seq.
|