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IDSAVERM_6253 TypeCDS
From7511100 nt length861
To7511960 aa length286
Gene pI6.65
Definitionputative DNA-binding protein M.W (Da)32314
NotePF01381: Helix-turn-helix AseI frg.F
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO1979 putative DNA-binding protein5280.0e+00
sgrSGR_1055 putative DNA-binding protein4482.0e-161
samSAM23877_2058 DNA-binding protein5310.0e+00
scabSCAB69261 putative DNA-binding protein4724.0e-170

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain15-7540.13.2e-10

HTH_31Helix-turn-helix21-7231.41.4e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_189187616.1 helix-turn-helix transcriptional regulator [Streptomyces alb... 13220.0e+00
GGN68895.1 transcriptional regulator [Streptomyces albiflavescens] 13180.0e+00
WP_099505053.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 13050.0e+00
WP_028805993.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 13050.0e+00
WP_151474054.1 helix-turn-helix transcriptional regulator [Streptomyces tri... 12942.9e-179
WP_081224084.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 12934.0e-179
WP_137306351.1 helix-turn-helix transcriptional regulator [Streptomyces las... 12926.4e-179
WP_067232044.1 helix-turn-helix transcriptional regulator [Streptomyces lon... 12926.7e-179
WP_171109065.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 12927.4e-179
WP_037624762.1 helix-turn-helix transcriptional regulator [Streptomyces aur... 12919.6e-179

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.1405 Seems to have no N-terminal signal seq.