| ID | SAVERM_6271
| Type | CDS
|
| From | 7527243
| nt length | 873
|
| To | 7526371
| aa length | 290
|
| Gene | glpQ6
| pI | 10.16
|
| Definition | putative glycerophosphoryl diester phosphodiesterase
| M.W (Da) | 31644
|
| Note | PF03009: Glycerophosphoryl diester phosphodiesterase family
| AseI frg. | F
|
| SignalP v.4.0 | Signal peptide | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1968 putative secreted hydrolase | 417 | 4.0e-149
|
| sgr | SGR_5556 putative secreted hydrolase | 333 | 6.0e-116
|
| sam | SAM23877_2046 putative secreted hydrolase | 389 | 1.0e-137
|
| scab | SCAB69411 putative glycerophosphoryl diester phosphodiesterase | 392 | 2.0e-139
|
| sace | SACE_4968 glycerophosphoryl diester phosphodiesterase | 214 | 3.0e-69
|
| bsub | BG13029 yhdW; similar to glycerophosphodiester phosphodiesterase [EC:3.1.4.46] | 157 | 9.0e-40
|
| ecoli | gi|16131321 cytoplasmic glycerophosphodiester phosphodiesterase [Escherichia coli K12] | 98 | 4.3e-22
|
| paer | PA2352 [gene=PA2352] [prot=probable glycerophosphoryl diester phosphodiesterase] [comment=PA2352] | 128 | 6.9e-31
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| GDPD | 1 | Glycerophosphoryl diester phosphodiesterase family | 39-281 | 137.1 | 8e-40
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_189187599.1 | glycerophosphodiester phosphodiesterase [Streptomyces albifl...
| 1098 | 2.7e-149 |
| WP_152772963.1 | glycerophosphodiester phosphodiesterase [Streptomyces spongi...
| 1098 | 3.2e-149 |
| WP_055491713.1 | glycerophosphodiester phosphodiesterase [Streptomyces sp. TP...
| 1095 | 9.5e-149 |
| WP_059133119.1 | glycerophosphodiester phosphodiesterase [Streptomyces sp. NR...
| 1084 | 3.9e-147 |
| WP_189781840.1 | glycerophosphodiester phosphodiesterase [Streptomyces capiti...
| 1083 | 6.5e-147 |
| WP_149513079.1 | glycerophosphodiester phosphodiesterase [Streptomyces apricu...
| 1081 | 1.1e-146 |
| WP_220294485.1 | glycerophosphodiester phosphodiesterase [Streptomyces sp. MB...
| 1081 | 1.4e-146 |
| WP_071367882.1 | glycerophosphodiester phosphodiesterase [Streptomyces colono...
| 1081 | 1.4e-146 |
| WP_107017613.1 | glycerophosphodiester phosphodiesterase [Streptomyces diosco...
| 1079 | 2.2e-146 |
| WP_131562263.1 | glycerophosphodiester phosphodiesterase [Streptomyces sp. KM...
| 1078 | 3.4e-146 |
PSORT result
| Localization | Certainty | PSORT said
|
| outside | 0.3000 | Seems to have a cleavable N-term signal seq.
|