| ID | SAVERM_6277
| Type | CDS
|
| From | 7535097
| nt length | 1101
|
| To | 7536197
| aa length | 366
|
| Gene | chaA
| pI | 7.77
|
| Definition | putative ionic transporter integral membrane protein
| M.W (Da) | 37369
|
| Note | PF01699: Sodium/calcium exchanger protein
| AseI frg. | F
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1962 ionic transporter | 570 | 0.0e+00
|
| sam | SAM23877_2040 putative ionic transporter y4hA | 511 | 0.0e+00
|
| scab | SCAB69471 putative ionic transporter integral membrane protein | 563 | 0.0e+00
|
| nfar | nfa11120 transporter | 482 | 2.4e-137
|
| mtub | gi|15608745 Probable ionic transporter integral membrane protein chaA [Mycobacterium tuberculosis H37Rv] | 449 | 1.0e-127
|
| cglu | gi|19552308 COG0387:Ca2+/H+ antiporter [Corynebacterium glutamicum] | 162 | 3.0e-41
|
| bsub | BG12922 yfkE; similar to H+/Ca2+ exchanger | 48 | 7.9e-07
|
| ecoli | gi|16129179 sodium-calcium/proton antiporter [Escherichia coli K12] | 201 | 4.9e-53
|
*coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Na_Ca_ex | 2 | Sodium/calcium exchanger protein | 36-188, 222-361 | 98.7 | 2.7e-28
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.5140 | Seems to have a cleavable N-term signal seq.
|