| ID | SAVERM_6293
| Type | CDS
|
| From | 7554314
| nt length | 1068
|
| To | 7555381
| aa length | 355
|
| Gene |
| pI | 7.02
|
| Definition | hypothetical protein
| M.W (Da) | 37886
|
| Note | PF01933: Uncharacterised protein family UPF0052
| AseI frg. | F
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1951 conserved hypothetical protein | 640 | 0.0e+00
|
| sgr | SGR_5571 conserved hypothetical protein | 560 | 0.0e+00
|
| sam | SAM23877_2026 putative gluconeogenesis factor | 647 | 0.0e+00
|
| scab | SCAB69671 hypothetical protein | 590 | 0.0e+00
|
| sace | SACE_2140 hypothetical protein | 293 | 7.0e-99
|
| nfar | nfa35920 hypothetical protein | 324 | 8.2e-90
|
| mtub | gi|15608560 hypothetical protein Rv1422 [Mycobacterium tuberculosis H37Rv] | 305 | 3.0e-84
|
| cglu | gi|19552802 COG0391:Uncharacterized ACR [Corynebacterium glutamicum] | 279 | 1.3e-76
|
| bsub | BG12401 yvcK; similar to unknown proteins | 179 | 1.7e-46
|
| ecoli | gi|16128748 putative phosphatase/sulfatase [Escherichia coli K12] | 126 | 1.9e-30
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| UPF0052 | 1 | Uncharacterised protein family UPF0052 | 40-307 | 244.7 | 1.1e-72
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_143637456.1 | uridine diphosphate-N-acetylglucosamine-binding protein YvcK...
| 1343 | 0.0e+00 |
| WP_200398993.1 | uridine diphosphate-N-acetylglucosamine-binding protein YvcK...
| 1343 | 0.0e+00 |
| WP_189840466.1 | uridine diphosphate-N-acetylglucosamine-binding protein YvcK...
| 1340 | 0.0e+00 |
| WP_055615084.1 | uridine diphosphate-N-acetylglucosamine-binding protein YvcK...
| 1340 | 0.0e+00 |
| QIY95193.1 | uridine diphosphate-N-acetylglucosamine-binding protein YvcK [Str...
| 1337 | 0.0e+00 |
| WP_054235926.1 | MULTISPECIES: uridine diphosphate-N-acetylglucosamine-bindin...
| 1335 | 0.0e+00 |
| GHB44995.1 | putative gluconeogenesis factor [Streptomyces umbrinus] >dbj
| 1335 | 0.0e+00 |
| WP_189288692.1 | uridine diphosphate-N-acetylglucosamine-binding protein YvcK...
| 1334 | 0.0e+00 |
| WP_168490468.1 | MULTISPECIES: uridine diphosphate-N-acetylglucosamine-bindin...
| 1333 | 0.0e+00 |
| WP_211179607.1 | uridine diphosphate-N-acetylglucosamine-binding protein YvcK...
| 1333 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.1553 | Seems to have no N-terminal signal seq.
|