| ID | SAVERM_6294
| Type | CDS
|
| From | 7555372
| nt length | 990
|
| To | 7556361
| aa length | 329
|
| Gene | whiA
| pI | 10.42
|
| Definition | putative sporulation regulatory protein
| M.W (Da) | 35079
|
| Note | PF02650: Uncharacterized BCR, COG1481
| AseI frg. | F
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | regulation
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1950 hypothetical protein | 522 | 0.0e+00
|
| sgr | SGR_5572 putative WhiA protein | 524 | 0.0e+00
|
| sam | SAM23877_2025 Sporulation transcription regulator WhiA | 540 | 0.0e+00
|
| scab | SCAB69681 putative sporulation regulatory protein | 541 | 0.0e+00
|
| sace | SACE_2141 sporulation regulatory protein | 455 | 8.0e-163
|
| nfar | nfa35910 hypothetical protein | 479 | 1.1e-136
|
| mtub | gi|15608561 PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN WHIA [Mycobacterium tuberculosis H37Rv] | 458 | 1.9e-130
|
| cglu | gi|19552801 COG1481:Uncharacterized BCR [Corynebacterium glutamicum] | 382 | 9.6e-108
|
| bsub | BG12402 yvcL; similar to hypothetical proteins | 112 | 2.3e-26
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| WhiA_N | 1 | WhiA N-terminal LAGLIDADG-like domain | 20-104 | 91.6 | 2.3e-26
|
| LAGLIDADG_WhiA | 1 | WhiA LAGLIDADG-like domain | 127-218 | 83.8 | 6e-24
|
| HTH_WhiA | 1 | WhiA C-terminal HTH domain | 221-303 | 70.0 | 1.5e-19
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.3241 | Seems to have no N-terminal signal seq.
|