| ID | SAVERM_6296
| Type | CDS
|
| From | 7559711
| nt length | 1008
|
| To | 7560718
| aa length | 335
|
| Gene | gap2
| pI | 4.89
|
| Definition | glyceraldehyde-3-phosphate dehydrogenase (sensitive to pentalenolactone)
| M.W (Da) | 36162
|
| Note | PF02800: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
| AseI frg. | F
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | main glycolytic pathways
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1947 glyceraldehyde-3-phosphate dehydrogenase | 614 | 0.0e+00
|
| sgr | SGR_5573 putative glyceraldehyde-3-phosphate dehydrogenase | 612 | 0.0e+00
|
| sam | SAM23877_2023 glyceraldehyde-3-phosphate dehydrogenase A | 598 | 0.0e+00
|
| scab | SCAB69701 glyceraldehyde-3-phosphate dehydrogenase (sensitive to pentalenolactone) | 604 | 0.0e+00
|
| cglu | gi|19552800 COG0057:Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Corynebacterium glutamicum] | 416 | 6.1e-118
|
| bsub | BG10827 gapA, gap; glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] | 438 | 2.4e-124
|
| ecoli | gi|16129733 glyceraldehyde-3-phosphate dehydrogenase [Escherichia coli K12] | 327 | 6.9e-91
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Gp_dh_C | 1 | Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain | 158-314 | 233.9 | 5.5e-70
|
| Gp_dh_N | 1 | Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain | 3-104 | 132.2 | 7e-39
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_237529663.1 | type I glyceraldehyde-3-phosphate dehydrogenase [Streptomyce...
| 1658 | 0.0e+00 |
| WP_030615029.1 | type I glyceraldehyde-3-phosphate dehydrogenase [Streptomyce...
| 1638 | 0.0e+00 |
| WP_142151229.1 | type I glyceraldehyde-3-phosphate dehydrogenase [Streptomyce...
| 1634 | 0.0e+00 |
| WP_058926002.1 | type I glyceraldehyde-3-phosphate dehydrogenase [Streptomyce...
| 1634 | 0.0e+00 |
| WP_020939324.1 | type I glyceraldehyde-3-phosphate dehydrogenase [Streptomyce...
| 1628 | 0.0e+00 |
| WP_030951405.1 | MULTISPECIES: type I glyceraldehyde-3-phosphate dehydrogenas...
| 1625 | 0.0e+00 |
|
| 1624 | 0.0e+00 |
| WP_093720299.1 | type I glyceraldehyde-3-phosphate dehydrogenase [Streptomyce...
| 1623 | 0.0e+00 |
| WP_171109010.1 | MULTISPECIES: type I glyceraldehyde-3-phosphate dehydrogenas...
| 1623 | 0.0e+00 |
| WP_218513054.1 | type I glyceraldehyde-3-phosphate dehydrogenase [Streptomyce...
| 1622 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.3080 | Seems to have no N-terminal signal seq.
|