| ID | SAVERM_6298
| Type | CDS
|
| From | 7562063
| nt length | 777
|
| To | 7562839
| aa length | 258
|
| Gene | tpiA
| pI | 5.18
|
| Definition | putative triosephosphate isomerase
| M.W (Da) | 27950
|
| Note | PF00121: Triosephosphate isomerase
| AseI frg. | F
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | main glycolytic pathways
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1945 triose phosphate isomerase | 486 | 2.0e-177
|
| sgr | SGR_5575 putative triosephosphate isomerase | 453 | 2.0e-164
|
| sam | SAM23877_2021 Triosephosphate isomerase | 489 | 1.0e-178
|
| scab | SCAB69721 putative triosephosphate isomerase | 468 | 9.0e-170
|
| sace | SACE_2145 triosephosphate isomerase | 360 | 9.0e-128
|
| nfar | nfa35870 tpi triosephosphate isomerase | 344 | 5.1e-96
|
| mtub | gi|15608576 triosephosphate isomerase [Mycobacterium tuberculosis H37Rv] | 340 | 5.6e-95
|
| cglu | gi|19552798 COG0149:Triosephosphate isomerase [Corynebacterium glutamicum] | 316 | 8.0e-88
|
| bsub | BG10897 tpi, tim; triosephosphate isomerase (TIM) [EC:5.3.1.1] | 231 | 4.2e-62
|
| ecoli | gi|16131757 triosephosphate isomerase [Escherichia coli K12] | 186 | 1.0e-48
|
| paer | PA4748 [gene=tpiA] [prot=triosephosphate isomerase] [comment=PA4748] | 178 | 3.8e-46
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| TIM | 1 | Triosephosphate isomerase | 7-252 | 302.4 | 1.9e-90
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2255 | Seems to have no N-terminal signal seq.
|