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IDSAVERM_63 TypeCDS
From72680 nt length222
To72901 aa length73
Gene pI8.22
Definitionputative transcriptional regulatory protein M.W (Da)7748
NotePF13443: Cro/C1-type HTH DNA-binding domain AseI frg.A
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO0148 putative transcriptional regulatory protein1294.0e-42
samSAM23877_4016 putative HTH-type transcriptional regulator YozG1221.0e-39
scabSCAB87431 putative transcriptional regulatory protein1393.0e-46
saceSACE_0542 transcriptional regulator, XRE family1273.0e-41
cglugi|19552514 COG3655:Predicted transcriptional regulator [Corynebacterium glutamicum]1061.9e-25
bsubBG13754 yozG; similar to transcriptional regulator953.3e-22
paerPA2785 [gene=PA2785] [prot=conserved hypothetical protein] [comment=PA2785]741.6e-15

*coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_261Cro/C1-type HTH DNA-binding domain7-6867.69.1e-19

HTH_31Helix-turn-helix13-6224.71.7e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_115506829.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 3651.8e-44
WP_013872065.1 MULTISPECIES: helix-turn-helix transcriptional regulator [Fr... 3633.8e-44
WP_171401676.1 helix-turn-helix transcriptional regulator [Streptomyces aso... 3624.2e-44
WP_030609318.1 MULTISPECIES: helix-turn-helix transcriptional regulator [Ac... 3624.2e-44
WP_232650045.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 3624.5e-44
WP_030724363.1 MULTISPECIES: helix-turn-helix transcriptional regulator [Ac... 3625.0e-44
WP_055611208.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 3625.0e-44
WP_069759895.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 3625.4e-44
WP_010696297.1 MULTISPECIES: helix-turn-helix transcriptional regulator [Ac... 3625.6e-44
WP_057613216.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 3608.4e-44

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.3050 Seems to have no N-terminal signal seq.