| ID | SAVERM_6324
| Type | CDS
|
| From | 7591661
| nt length | 750
|
| To | 7592410
| aa length | 249
|
| Gene |
| pI | 6.79
|
| Definition | putative ArsR-family transcriptional regulator
| M.W (Da) | 26552
|
| Note | putative IdeR-binding site: TCAGTTTAGGTATGCCTAA(7591570:7591588)
| AseI frg. | F
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | regulation
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1926 putative DNA-binding protein | 396 | 4.0e-142
|
| sgr | SGR_5594 putative ArsR-family transcriptional regulator | 391 | 3.0e-140
|
| sam | SAM23877_1997 DNA-binding protein | 394 | 4.0e-141
|
| scab | SCAB70021 putative ArsR-family transcriptional regulator | 389 | 2.0e-139
|
| sace | SACE_2173 probable transcriptional regulator | 202 | 1.0e-65
|
| nfar | nfa35610 DNA-binding protein | 186 | 1.7e-48
|
| mtub | gi|57116868 PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN [Mycobacterium tuberculosis H37Rv] | 180 | 9.2e-47
|
| cglu | gi|19552778 COG2345:Predicted transcriptional regulator [Corynebacterium glutamicum] | 171 | 2.3e-44
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| HTH_5 | 1 | Bacterial regulatory protein, arsR family | 25-69 | 32.1 | 7.3e-08
|
| HTH_24 | 1 | Winged helix-turn-helix DNA-binding | 27-69 | 27.8 | 1.3e-06
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_202498568.1 | ArsR family transcriptional regulator [Streptomyces sp. SID5...
| 1059 | 1.8e-144 |
| WP_190170294.1 | transcriptional regulator [Streptomyces mirabilis] >dbj
| 997 | 3.1e-135 |
| WP_060902164.1 | MULTISPECIES: transcriptional regulator [unclassified Strept...
| 996 | 5.5e-135 |
| WP_067364228.1 | transcriptional regulator [Streptomyces olivochromogenes] >g...
| 994 | 1.2e-134 |
| WP_075026225.1 | transcriptional regulator [Streptomyces mirabilis]
| 993 | 1.3e-134 |
| WP_217571472.1 | transcriptional regulator [Streptomyces sp. GbtcB7]
| 993 | 1.6e-134 |
| WP_097226267.1 | transcriptional regulator [Streptomyces sp. OV198]
| 992 | 1.8e-134 |
| WP_143601301.1 | MULTISPECIES: transcriptional regulator [unclassified Strept...
| 991 | 2.8e-134 |
| WP_095855309.1 | transcriptional regulator [Streptomyces sp. Ag82_O1-15] >gb
| 991 | 2.9e-134 |
| WP_097284189.1 | transcriptional regulator [Streptomyces sp. OK228]
| 990 | 4.2e-134 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.4050 | Seems to have no N-terminal signal seq.
|