| ID | SAVERM_6325
| Type | CDS
|
| From | 7592407
| nt length | 1425
|
| To | 7593831
| aa length | 474
|
| Gene | sufB
| pI | 4.62
|
| Definition | putative FeS assembly protein SufB
| M.W (Da) | 52774
|
| Note | PF01458: Uncharacterized protein family (UPF0051)
| AseI frg. | F
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1925 conserved hypothetical protein | 957 | 0.0e+00
|
| sgr | SGR_5595 conserved hypothetical protein | 899 | 0.0e+00
|
| sam | SAM23877_1996 component of SufBCD complex | 957 | 0.0e+00
|
| scab | SCAB70031 putative FeS assembly protein SufB | 977 | 0.0e+00
|
| sace | SACE_2174 putative iron-regulated ABC-type transporter | 855 | 0.0e+00
|
| nfar | nfa35600 hypothetical protein | 822 | 0.0e+00
|
| mtub | gi|15608599 hypothetical protein Rv1461 [Mycobacterium tuberculosis H37Rv] | 415 | 3.0e-117
|
| cglu | gi|19552777 COG0719:Predicted membrane components of an uncharacterized iron-regulated ABC-type transporter SufB [Corynebacterium glutamicum] | 801 | 0.0e+00
|
| bsub | BG14007 yurU; similar to hypothetical proteins | 632 | 0.0e+00
|
| ecoli | gi|16129639 putative transport protein [Escherichia coli K12] | 367 | 9.1e-103
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| UPF0051 | 1 | Uncharacterized protein family (UPF0051) | 220-445 | 249.4 | 2.8e-74
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_059079331.1 | Fe-S cluster assembly protein SufB [Streptomyces scabiei] >d...
| 2529 | 0.0e+00 |
| WP_148013419.1 | Fe-S cluster assembly protein SufB [Streptomyces sp. me109] ...
| 2529 | 0.0e+00 |
| WP_164325991.1 | MULTISPECIES: Fe-S cluster assembly protein SufB [Streptomyc...
| 2526 | 0.0e+00 |
| WP_013004546.1 | MULTISPECIES: Fe-S cluster assembly protein SufB [Streptomyc...
| 2525 | 0.0e+00 |
| WP_101405820.1 | MULTISPECIES: Fe-S cluster assembly protein SufB [Streptomyc...
| 2525 | 0.0e+00 |
| WP_086747586.1 | Fe-S cluster assembly protein SufB [Streptomyces scabiei]
| 2524 | 0.0e+00 |
| WP_046704503.1 | Fe-S cluster assembly protein SufB [Streptomyces europaeisca...
| 2523 | 0.0e+00 |
| WP_033527159.1 | Fe-S cluster assembly protein SufB [Streptomyces sp. MG28] >...
| 2522 | 0.0e+00 |
| WP_189840490.1 | MULTISPECIES: Fe-S cluster assembly protein SufB [Streptomyc...
| 2522 | 0.0e+00 |
| WP_037691495.1 | Fe-S cluster assembly protein SufB [Streptomyces scabiei] >g...
| 2519 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.4264 | Seems to have no N-terminal signal seq.
|