| ID | SAVERM_6330
| Type | CDS
|
| From | 7597480
| nt length | 468
|
| To | 7597947
| aa length | 155
|
| Gene |
| pI | 4.5
|
| Definition | putative NifU homolog (SUF system FeS assembly protein), probably involved in Fe-S cluster formation
| M.W (Da) | 17069
|
| Note | PF01592: NifU-like N terminal domain
| AseI frg. | F
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1920 conserved hypothetical protein | 300 | 2.0e-107
|
| sgr | SGR_5600 putative nitrogen fixation protein NifU-related protein | 290 | 2.0e-103
|
| sam | SAM23877_1991 NifU-like protein | 298 | 1.0e-106
|
| scab | SCAB70081 putative NifU homolog (SUF system FeS assembly protein), probably involved in Fe-S cluster formation | 299 | 1.0e-106
|
| sace | SACE_2178 SUF system FeS assembly protein | 194 | 3.0e-65
|
| nfar | nfa35560 hypothetical protein | 171 | 2.0e-44
|
| mtub | gi|15608603 POSSIBLE NITROGEN FIXATION RELATED PROTEIN [Mycobacterium tuberculosis H37Rv] | 172 | 9.3e-45
|
| cglu | gi|19552773 COG0822:NifU homologs involved in Fe-S cluster formation [Corynebacterium glutamicum] | 165 | 8.0e-43
|
| bsub | BG14008 yurV; similar to NifU protein homolog | 130 | 4.6e-32
|
| ecoli | gi|16130454 involved in Fe-S biosynthesis [Escherichia coli K12] | 55 | 1.3e-09
|
| paer | PA3813 [gene=iscU] [prot=probable iron-binding protein IscU] [comment=PA3813] | 51 | 4.1e-08
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| NifU_N | 1 | NifU-like N terminal domain | 6-129 | 93.3 | 1.2e-26
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_124443152.1 | SUF system NifU family Fe-S cluster assembly protein [Strept...
| 804 | 8.8e-109 |
| WP_190037615.1 | SUF system NifU family Fe-S cluster assembly protein [Strept...
| 803 | 1.0e-108 |
| WP_150952240.1 | MULTISPECIES: SUF system NifU family Fe-S cluster assembly p...
| 800 | 2.9e-108 |
| WP_053755563.1 | SUF system NifU family Fe-S cluster assembly protein [Strept...
| 799 | 4.1e-108 |
| WP_165340002.1 | SUF system NifU family Fe-S cluster assembly protein [Strept...
| 798 | 6.6e-108 |
| WP_055515225.1 | SUF system NifU family Fe-S cluster assembly protein [Strept...
| 798 | 6.7e-108 |
| WP_189770252.1 | SUF system NifU family Fe-S cluster assembly protein [Strept...
| 798 | 6.8e-108 |
| WP_119106048.1 | MULTISPECIES: SUF system NifU family Fe-S cluster assembly p...
| 797 | 7.9e-108 |
| NGO07433.1 | SUF system NifU family Fe-S cluster assembly protein [Streptomyce...
| 797 | 9.3e-108 |
| WP_210883730.1 | SUF system NifU family Fe-S cluster assembly protein [Strept...
| 796 | 1.1e-107 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2440 | Seems to have no N-terminal signal seq.
|