-- | --

IDSAVERM_6375 TypeCDS
From7646360 nt length1332
To7647691 aa length443
Gene pI5.2
Definitionputative secreted pectate lyase M.W (Da)46816
NotePF00544: Pectate lyase AseI frg.F
SignalP v.4.0Signal peptide | plot Categoryspecific pathways


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO1880 putative secreted pectate lyase6710.0e+00
sgrSGR_216 putative secreted pectate lyase4753.0e-167
samSAM23877_1954 Pectate lyase6740.0e+00
scabSCAB70551 putative secreted pectate lyase5630.0e+00
bsubBG10840 pel; pectate lyase [EC:4.2.2.2]3371.1e-93

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; bsub, Bacillus subtilis;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Pec_lyase_C1Pectate lyase154-362166.84.4e-49

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_168490408.1 pectate lyase [Streptomyces sp. RLB1-33] >gb 18450.0e+00
WP_067364372.1 pectate lyase [Streptomyces olivochromogenes] >gb 18420.0e+00
WP_212727600.1 pectate lyase [Streptomyces mirabilis] >gb 18420.0e+00
QIY95123.1 pectate lyase [Streptomyces sp. S1D4-11] 18380.0e+00
WP_143607754.1 MULTISPECIES: pectate lyase [unclassified Streptomyces] >gb 18370.0e+00
WP_143654816.1 pectate lyase [Streptomyces sp. S1A1-7] >gb 18360.0e+00
WP_143612981.1 MULTISPECIES: pectate lyase [unclassified Streptomyces] >gb 18310.0e+00
WP_097284162.1 pectate lyase [Streptomyces sp. OK228] >emb 18310.0e+00
WP_181651741.1 pectate lyase [Streptomyces sp. WAC00263] >lcl 18310.0e+00
WP_217571526.1 pectate lyase [Streptomyces sp. GbtcB7] 18300.0e+00

PSORT result

LocalizationCertaintyPSORT said
outside0.3000 Seems to have a cleavable N-term signal seq.