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IDSAVERM_6378 TypeCDS
From7649923 nt length1113
To7651035 aa length370
Gene pI4.99
Definitionputative secreted pectate lyase M.W (Da)37950
Note AseI frg.F
SignalP v.4.0Signal peptide | plot Categoryspecific pathways


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO7228 putative polysaccharide lyase.1126.0e-28
samSAM23877_4806 Polysaccharide lyase1171.0e-29
scabSCAB70591 putative secreted pectate lyase5870.0e+00
bsubBG12493 ywoF; hypothetical protein571.3e-09
ecoligi|16128278 hypothetical protein b0293 [Escherichia coli K12]331.8e-02

*coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Chondroitinas_B1Chondroitinase B33-12431.77.1e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
SOE26798.1 Pectin methylesterase [Streptomyces sp. OK228] 14580.0e+00
WP_143612978.1 MULTISPECIES: right-handed parallel beta-helix repeat-contai... 14560.0e+00
WP_143607749.1 MULTISPECIES: right-handed parallel beta-helix repeat-contai... 14550.0e+00
WP_067364380.1 pectate lyase [Streptomyces olivochromogenes] >gb 14540.0e+00
WP_144315294.1 pectate lyase [Streptomyces sp. RLB3-17] >gb 14530.0e+00
WP_095855347.1 MULTISPECIES: pectate lyase [unclassified Streptomyces] >gb 14530.0e+00
WP_168490405.1 pectate lyase [Streptomyces sp. RLB1-33] >gb 14530.0e+00
WP_054232300.1 pectate lyase [Streptomyces sp. OK228] 14530.0e+00
WP_212727602.1 pectate lyase [Streptomyces mirabilis] >gb 14480.0e+00
WP_143654814.1 pectate lyase [Streptomyces sp. S1A1-7] >gb 14480.0e+00

PSORT result

LocalizationCertaintyPSORT said
outside0.3000 Seems to have a cleavable N-term signal seq.