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IDSAVERM_6383 TypeCDS
From7657326 nt length831
To7656496 aa length276
Gene pI9.59
Definitionputative secreted pectate lyase M.W (Da)28762
NoteTat substrate, PF03211: Pectate lyase AseI frg.F
SignalP v.4.0Signal peptide | plot Categorymiscellaneous


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO1110 putative secreted lyase3203.0e-111
samSAM23877_1193 putative secreted lyase3051.0e-105
scabSCAB82411 putative secreted pectate lyase2622.0e-88
saceSACE_4362 pectate lyase2261.0e-74
bsubBG14129 yvpA; similar to pectate lyase1261.6e-30

*coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; bsub, Bacillus subtilis;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Pectate_lyase1Pectate lyase48-249270.47.7e-81

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_097226286.1 pectate lyase [Streptomyces sp. OV198] >emb 9781.9e-131
WP_095855355.1 pectate lyase [Streptomyces sp. Ag82_O1-15] >gb 9712.0e-130
WP_143607742.1 MULTISPECIES: pectate lyase [unclassified Streptomyces] >gb 9661.2e-129
SFE64385.1 Pectate lyase [Streptomyces mirabilis] 9641.5e-129
WP_075026174.1 pectate lyase [Streptomyces mirabilis] 9661.6e-129
WP_073952370.1 pectate lyase [Streptomyces kebangsaanensis] 9652.1e-129
WP_097284155.1 MULTISPECIES: pectate lyase [unclassified Streptomyces] >gb 9642.9e-129
GHD54202.1 pectate lyase [Streptomyces mirabilis] 9613.7e-129
WP_190170337.1 pectate lyase [Streptomyces mirabilis] 9633.9e-129
WP_217571544.1 pectate lyase [Streptomyces sp. GbtcB7] 9625.7e-129

PSORT result

LocalizationCertaintyPSORT said
membrane0.2168 Seems to have no N-terminal signal seq.