| ID | SAVERM_6406
| Type | CDS
|
| From | 7681403
| nt length | 615
|
| To | 7680789
| aa length | 204
|
| Gene | cobH
| pI | 6.63
|
| Definition | putative precorrin-8X methylmutase
| M.W (Da) | 21426
|
| Note | cobalamin biosynthesis, PF02570: Precorrin-8X methylmutase
| AseI frg. | S
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of coenzymes & prosthetic groups
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3282 putative precorrin-8X methylmutase | 99 | 1.0e-26
|
| sgr | SGR_3823 putative precorrin-8X methylmutase | 98 | 2.0e-26
|
| sam | SAM23877_1930 Precorrin-8X methylmutase | 318 | 1.0e-112
|
| scab | SCAB9791 putative precorrin-8X methylmutase | 100 | 8.0e-27
|
| sace | SACE_5952 precorrin-8X methylmutase | 98 | 3.0e-26
|
| nfar | nfa31510 cobH precorrin 8X methylmutase | 127 | 9.0e-31
|
| mtub | gi|15609202 precorrin-8X methylmutase [Mycobacterium tuberculosis H37Rv] | 110 | 8.7e-26
|
| paer | PA2905 [gene=cobH] [prot=precorrin isomerase CobH] [comment=PA2905] | 106 | 1.3e-24
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| CbiC | 1 | Precorrin-8X methylmutase | 15-193 | 185.9 | 5.7e-55
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_234048814.1 | precorrin-8X methylmutase [Streptomyces sp. ZYC-3]
| 839 | 3.2e-112 |
| WP_206440366.1 | precorrin-8X methylmutase [Streptomyces scabichelini]
| 837 | 5.4e-112 |
| WP_186003209.1 | MULTISPECIES: precorrin-8X methylmutase [Streptomyces]
| 834 | 7.2e-112 |
| WP_180289334.1 | MULTISPECIES: precorrin-8X methylmutase [Streptomyces]
| 835 | 8.3e-112 |
| WP_053755581.1 | precorrin-8X methylmutase [Streptomyces sp. MMG1533]
| 833 | 9.1e-112 |
| KOU55378.1 | precorrin-8X methylmutase [Streptomyces sp. MMG1533]
| 832 | 1.7e-111 |
| WP_200423201.1 | precorrin-8X methylmutase [Streptomyces sp. Y2F8-2] >dbj
| 830 | 2.3e-111 |
| MPY54835.1 | precorrin-8X methylmutase [Streptomyces acidicola]
| 831 | 2.7e-111 |
| QDO04214.1 | precorrin-8X methylmutase [Streptomyces sp. RLB1-9] >gb
| 829 | 3.3e-111 |
| GHD54314.1 | precorrin-8X methylmutase [Streptomyces mirabilis]
| 830 | 3.4e-111 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.1553 | Seems to have no N-terminal signal seq.
|