| ID | SAVERM_6415
| Type | CDS
|
| From | 7694429
| nt length | 3654
|
| To | 7690776
| aa length | 1217
|
| Gene | cobN
| pI | 4.51
|
| Definition | putative cobalamin biosynthesis protein
| M.W (Da) | 131231
|
| Note | cobalamin biosynthesis, PF02514: CobN/Magnesium Chelatase
| AseI frg. | S
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of coenzymes & prosthetic groups
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1849 cobalamin biosynthesis protein | 2231 | 0.0e+00
|
| sgr | SGR_3825 putative cobalamin biosynthesis protein cobN | 1558 | 0.0e+00
|
| sam | SAM23877_1921 Aerobic cobaltochelatase subunit CobN | 2246 | 0.0e+00
|
| scab | SCAB9771 putative cobalamin biosynthesis protein | 1578 | 0.0e+00
|
| sace | SACE_5955 cobalamin biosynthesis protein N | 1608 | 0.0e+00
|
| nfar | nfa31370 magnesium chelatase | 1589 | 0.0e+00
|
| mtub | gi|15609199 cobaltochelatase [Mycobacterium tuberculosis H37Rv] | 1490 | 0.0e+00
|
| paer | PA2944 [gene=cobN] [prot=cobalamin biosynthetic protein CobN] [comment=PA2944] | 894 | 0.0e+00
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| CobN-Mg_chel | 1 | CobN/Magnesium Chelatase | 102-1196 | 1362.3 | 0
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_200399109.1 | cobaltochelatase subunit CobN [Streptomyces sp. ZYC-3] >gb
| 5721 | 0.0e+00 |
| WP_190230196.1 | cobaltochelatase subunit CobN [Streptomyces umbrinus] >dbj
| 5720 | 0.0e+00 |
| WP_103549355.1 | cobaltochelatase subunit CobN [Streptomyces populi] >gb
| 5720 | 0.0e+00 |
| WP_164374306.1 | cobaltochelatase subunit CobN [Streptomyces sp. SID14446] >g...
| 5720 | 0.0e+00 |
| WP_081223699.1 | cobaltochelatase subunit CobN [Streptomyces sp. M41(2017)] >...
| 5718 | 0.0e+00 |
| WP_189840577.1 | cobaltochelatase subunit CobN [Streptomyces umbrinus]
| 5712 | 0.0e+00 |
| GHB46010.1 | cobaltochelatase subunit CobN [Streptomyces umbrinus]
| 5705 | 0.0e+00 |
| WP_055616203.1 | cobaltochelatase subunit CobN [Streptomyces phaeochromogenes...
| 5704 | 0.0e+00 |
| WP_028806949.1 | cobaltochelatase subunit CobN [Streptomyces sp. 303MFCol5.2]
| 5697 | 0.0e+00 |
| WP_143637108.1 | cobaltochelatase subunit CobN [Streptomyces sp. IB201691-2A2...
| 5697 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.1638 | Seems to have no N-terminal signal seq.
|