SAVERM_6427

ID SAVERM_6427 Type CDS
From 7707369 nt length 222
To 7707590 aa length 73
Gene pI 11.21
Definition putative transcriptional regulator M.W (Da) 7699
Note AseI frg. S
SignalP v.4.0 Non-secretory protein | plot Category regulation

Orthologs (if any)

Bacteria*	Reciprocally best hit to	Score	E-value
coel	SCO1839 putative transcriptional regulator	137	2.0e-45
sgr	SGR_5654 conserved hypothetical protein	139	5.0e-46
sam	SAM23877_1910 Hypothetical protein	139	5.0e-46
scab	SCAB70971 putative transcriptional regulator	137	3.0e-45
sace	SACE_2188 transcriptional regulator	109	2.0e-34
nfar	nfa34870 hypothetical protein	87	2.3e-19
mtub	gi\|57116871 POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN [Mycobacterium tuberculosis H37Rv]	66	3.0e-13

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv;

Pfam search result

no hits.

BLAST search result (top 10 hits)

ID	Description	Score	E-value
WP_071368692.1	helix-turn-helix domain-containing protein [Streptomyces col...	215	1.4e-21
WP_030578326.1	MULTISPECIES: helix-turn-helix domain-containing protein [St...	215	1.4e-21
WP_018533414.1	MULTISPECIES: helix-turn-helix domain-containing protein [St...	215	1.4e-21
WP_007263382.1	MULTISPECIES: helix-turn-helix domain-containing protein [St...	215	1.4e-21
WP_006123601.1	MULTISPECIES: helix-turn-helix domain-containing protein [St...	215	1.4e-21
WP_187144825.1	helix-turn-helix domain-containing protein [Streptomyces sp....	215	1.5e-21
WP_199883310.1	helix-turn-helix domain-containing protein [Streptomyces sp....	215	1.5e-21
WP_018518904.1	MULTISPECIES: helix-turn-helix domain-containing protein [St...	215	1.5e-21
WP_030021347.1	MULTISPECIES: helix-turn-helix domain-containing protein [St...	215	1.5e-21
WP_189129803.1	helix-turn-helix domain-containing protein [Streptomyces tyr...	215	1.5e-21

PSORT result

Localization	Certainty	PSORT said
cytoplasm	0.3172	Seems to have no N-terminal signal seq.

ID	SAVERM_6427	Type	CDS
From	7707369	nt length	222
To	7707590	aa length	73
Gene		pI	11.21
Definition	putative transcriptional regulator	M.W (Da)	7699
Note		AseI frg.	S
SignalP v.4.0	Non-secretory protein \| plot	Category	regulation